Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1714 |
Symbol | |
ID | 5054585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1546711 |
End bp | 1547712 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640469257 |
Product | eRF1 domain-containing 1 protein |
Protein accession | YP_001153917 |
Protein GI | 145591915 |
COG category | [R] General function prediction only |
COG ID | [COG1537] Predicted RNA-binding proteins |
TIGRFAM ID | [TIGR00111] probable translation factor pelota |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.839139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0545178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGATACG AGGTTGACAA GAGGCGGCGT ATTGTAAGAG TCACGCCTGA GAGGGACGAG GACCTCTATT TTCTCTACCT CCTAATAGAT GTCGGTGACG TGGTGAGAGG GTGGACTGTG AGGGAGTACA AACCGGACGG CACGAAGGAG GGAGAGCGGG TTAAAATGTT TCTTGGCATT AAGGTCGAGG CGTTGGAGTA CCACAAGTTC CGCGGTAGCT TGAGAGTGAG GGGGCCTGTG GTGGAGGTCG AGGAGGGCAT AGAGGGCGTC AAGGGGAGGA GGCACACCTT TGACATAGTG GCTGGGAGAG AGGTCGAGAT CGAAAAGGGA GACGAGGAGG CTCTAGAGGC GGCCGAAGGC GTGTTGGAGA TGGCCAAGGG CATACTGCCG AGGATTCTCC TGGTGTCTGT AGACGACGAG GAGGCGGCCT TTGCCTACGT GACGGCGTTG GGAGTAGAGG TATTGTATTT TCTACGCAAC GACGCCAGGA GAGGTGGTGA GGAGGGGAGC CTATTAGACG AATTTCTAGC CGCGGTGGGA AAGGCAACGG AGAACCTAAG GCGTCGCTAC AACCCAGACA AGGTCGTGCT CGCAGGCCCC CACATTATCT TGGAACATGT TGCGAGATAC GTACACGGAG ACCGCATCCC GCAGAGCTCT GGCGGCCTAG CCGGAGTGTA CGAATTCGTG AGAAGAGGGC TCTACGACGC GTTTAAGGCC GAGATAGGCT TCTCAGCGTA TGAAAAACTT CTGCAACTAT TAGCTACGAA CAGCGAGAGG GTGGCGACGG GACCTAAAGA TGTTGAGGAG GCAGCCTCTG CTGGGCGCAT TGACGCGTTG CTGGTGCTGG ATTCTTTCAT AAAAGAAAAC CCGAGAGAGG TCTGGGCTAT TATATCCCGC GCGTATAAAA GCCGTAGCAA GATCTTCATA ATTCGAGAAG ATACAGAAAT AGGCGTTGGG CTTAGAGCAA TGGGAGGAGT TGCAGCTATA TTGAGATGGT AA
|
Protein sequence | MRYEVDKRRR IVRVTPERDE DLYFLYLLID VGDVVRGWTV REYKPDGTKE GERVKMFLGI KVEALEYHKF RGSLRVRGPV VEVEEGIEGV KGRRHTFDIV AGREVEIEKG DEEALEAAEG VLEMAKGILP RILLVSVDDE EAAFAYVTAL GVEVLYFLRN DARRGGEEGS LLDEFLAAVG KATENLRRRY NPDKVVLAGP HIILEHVARY VHGDRIPQSS GGLAGVYEFV RRGLYDAFKA EIGFSAYEKL LQLLATNSER VATGPKDVEE AASAGRIDAL LVLDSFIKEN PREVWAIISR AYKSRSKIFI IREDTEIGVG LRAMGGVAAI LRW
|
| |