| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1708 |
|---|
| Symbol | |
|---|
| ID | 5054549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1542553 |
|---|
| End bp | 1543101 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640469251 |
|---|
| Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
|---|
| Protein accession | YP_001153911 |
|---|
| Protein GI | 145591909 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.363321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0699545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGAGG CAGTGTTTCT GGGTCGGGGA GGACAAGGGG CGGTGACTGC TGTCCAACTT
CTCGCCTATG CCGCAGCCCT GGAGGGGAAG AAGGCACAGG CGTTGCCCGA GTTCGGCGCA
GAGAGGAGAG GGGCCATAGT GAGGGCCTAC CTCAGAGTGG GGGATGTGCT TCTACATTCT
TCGGTGAAAA AGGCGGATTA TGTGGTGGTG CTGGACGGGC GTATTGTCGA GCAGATCGAT
GTGAGGCAAT ACGGCAAGCC GGGAGCCGTG TATATAGTGA ACAGCAAGAC GCCGGCGGAT
TGGTACATAG CCATAGACGC CACCTCCATT GCGTTGAAGC ACGGCCTTGT TGTGGCTGGG
TGGCCTGTGG TTAATCTAAT AATGGCAGCG GCGCTAGCTG CTGTGAGTGG GCTAGTTTCT
CTAGACAGCA TCGTGAAGGC GATTCCAGAA TACGTACCTA AGCGATTTGT CGAGAGTAAC
ATAAAGGCCG TGGTGGAGGG CTACGAGGTT GCTAAGAGGA GCTTAAGGCC AGCGCCCTCC
GTCGATTGA
|
|---|
| Protein sequence | MFEAVFLGRG GQGAVTAVQL LAYAAALEGK KAQALPEFGA ERRGAIVRAY LRVGDVLLHS
SVKKADYVVV LDGRIVEQID VRQYGKPGAV YIVNSKTPAD WYIAIDATSI ALKHGLVVAG
WPVVNLIMAA ALAAVSGLVS LDSIVKAIPE YVPKRFVESN IKAVVEGYEV AKRSLRPAPS
VD
|
|---|
| |