Gene Pars_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1706 
Symbol 
ID5054529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1541005 
End bp1542159 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content57% 
IMG OID640469249 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_001153909 
Protein GI145591907 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.595265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.177581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGT TGACAGTTCA GAAAACCGCG CTGACGGGGA ACTACGCAGT GGCCTATGCG 
GTGAAGGCGG CGAAGCCCCA CGTGATAGCC GCCTACCCCA TCACCCCGCA GACGTCGATA
GTGGAGAAGC TCTCAGAGTT CGTCGAGAAG GGGGAACTCA GCGCAAGGTT CGTCAACGTG
GAGTCTGAAT TCGCCGCCAT GTCCGTGGTC TATGGAGCCG CAATGGCGGG AGCCAGGGCG
TTTACGGCCA CCTCCTCCCA CGGCCTGCTC TACATGTACG AAGCCACTTG GTGGGCCGCG
CTTAGCAGGG CACCGGTCGT CATGGCAGTG GTGACTAGGA CAATAGGCCC TCCATGGAAT
ATCCACGTAG AGCACAACGA CATCCTCACC CTCAGAGACT CCGGCTGGAT TATTGGGATG
GCCGAGACGG TGCAGGAGGT GTTTGACATG ACGCTACAAG CCTTCAGAAT AGCTGAAGCC
GCACTACTGC CCACGGCCAT AGGCCTAGAC GGCTTTATTT TAAGCCACTC CACAGAGCCC
GTCGAAGTGA CGCCACAAGA TATAGTCGAC AAATTCCTAC CCCCGCGGAG ACCCGATGCC
CCGATAACAC TCCGCCCCGG CGAGCCGGTG ATCTTCGGCA ACTTGCCCTC CGACAACAAA
ATACACGCAA GACACAAAGT AGCGGCTGTG TACGAGGCCC AGAAACAAGC GAAGGAGATC
ATAAAGAAGA CAGATGAAGA ATACGGAAAA TTAACCGGCA GGAGCTACGG AGGGCTTGTC
GAGTGGTACA AGACAGGCGA TGCCAAATAC GCCGCCGTCT GCATGGGGGC TTGGTGTAGC
GATGCGAAGG CGGCAGTAGA TGCCCTAAGG AAGCGCGGCA TCCCCATCGG CCTAATGAGA
GTCAGATTCC TCAGACCCTT CCCCAGCGAA GAGGTCGCCA AGCTCGACCA ATGTGAAAAA
GTCATCGTCT TCGACAGAGA CATAACCCCA CTAGGCGGCG TTCTTGGGAT AGAGATGAGG
GCCCACCTGA CCAGGGCCGA GGTGGTCAAC ATCGTCGCCG GAATCGCCGG CGTCGACTTC
GACGCCCAGG GCTTCCTAGA CGCCGTGCAG AAAGCGGTAG AAGGCCAATA CAGAGGTGTG
GAGTTCGTAA TATGA
 
Protein sequence
MKALTVQKTA LTGNYAVAYA VKAAKPHVIA AYPITPQTSI VEKLSEFVEK GELSARFVNV 
ESEFAAMSVV YGAAMAGARA FTATSSHGLL YMYEATWWAA LSRAPVVMAV VTRTIGPPWN
IHVEHNDILT LRDSGWIIGM AETVQEVFDM TLQAFRIAEA ALLPTAIGLD GFILSHSTEP
VEVTPQDIVD KFLPPRRPDA PITLRPGEPV IFGNLPSDNK IHARHKVAAV YEAQKQAKEI
IKKTDEEYGK LTGRSYGGLV EWYKTGDAKY AAVCMGAWCS DAKAAVDALR KRGIPIGLMR
VRFLRPFPSE EVAKLDQCEK VIVFDRDITP LGGVLGIEMR AHLTRAEVVN IVAGIAGVDF
DAQGFLDAVQ KAVEGQYRGV EFVI