Gene Pars_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1676 
Symbol 
ID5054769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1513947 
End bp1514612 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID640469217 
ProductB3/4 domain-containing protein 
Protein accessionYP_001153879 
Protein GI145591877 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCTA TAGTCAACGA AGTGAGGAAT CTGGGCGTAT TTGTGGCTTA CGACGTAGTC 
AAGGGGGTTG ACAACACCAA GTACCTCCCT CAGCTGGAGG AGGAGATTAG GCGTGCGGTG
GAGGAGACGC GGCAGTCGCT GTCGCTAGAG ACGCTGAAGG ATCACCCCAT AATTAGGGCC
TACCGCGACT TCTACTGGAG GGTTCTAGGC ATAGATCCCA CGAAGCAGAG GCCGGCCCAG
GAGGCGTTGC TGAGGAGGGT CCTCCGCGGC GAGCCGTTGC CCCGGATAAA CCCCGTCGTT
GACGCGGGGA ACGCCGCGTC GGTAAAGTAC ATGGTCCCCA TAGGGCTGTA CGACGTGGCG
AAAATTAGGG GAGGGCCTCT GCGGATTAGG ATGTCTAGGA AGGGGGAGGT CTTCCACCCA
ATAGGGGGCT CCCCCATGGA GCTGGAGAAC CAGATAGTAC TCGCCGCGGA CGGCCAGATA
CTCCATATCT ACCCGTATAG AGACAGCGTG GAGACAAAAA TAGAGGAGGG CACGCGGGAC
GTGTTGGTGG TGGTTGCCGG CGTCGCTGGG GTTGGAGAGG AGAGGCTGGT ACAGACGGCG
AAGTACCTAC GCGGTCTTCT CTCACTATTG GGAGGCGTCC CCGCAGGGGA AATTACGCTA
GCGTAG
 
Protein sequence
MLAIVNEVRN LGVFVAYDVV KGVDNTKYLP QLEEEIRRAV EETRQSLSLE TLKDHPIIRA 
YRDFYWRVLG IDPTKQRPAQ EALLRRVLRG EPLPRINPVV DAGNAASVKY MVPIGLYDVA
KIRGGPLRIR MSRKGEVFHP IGGSPMELEN QIVLAADGQI LHIYPYRDSV ETKIEEGTRD
VLVVVAGVAG VGEERLVQTA KYLRGLLSLL GGVPAGEITL A