Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1667 |
Symbol | |
ID | 5054317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1504195 |
End bp | 1505586 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640469208 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001153870 |
Protein GI | 145591868 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.146167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAGGTA AAAGTTTTAT AGATAGGGTA GGCTACGTGA CAATGTCGTA TAGCGTATTA GAGGCGCTCA GAAACAACCC AGACGCGGTG AGGAAGGTCT TAGTTGCCAG GAGGATGGAT CCGTCTCTCG TCGAAAAATT CCTCGGACTA GACGAGCGCT GGAGGCAGTT GAAAAAGGAG GTGGACGAGC TGAGGCACGA GTATAACAAG CTCTCAAGGG AAGGGGCCAG GGCGCCGCCG GAGAGGCGCA GGGAATTGGT AGAAAGGGCA AAGGAACTCG CGGCGAGGTT GGAGAAGGTG GAGAAAGAGT TGGAAGATGT GGAGAAGGCC AGGGAGGAGG TTTTGTGGAG TTTCCCCAAT CTCATACACG AATCTGTGCC CACATGTCCT GAGGGGGTTG ACTCCGTCCC AGTTAGATAT TGGGGAGTGG TAAAGGTGGC AAATAACGCG GCTGAACTGC CACGGGGGGT TGACTACGTA GTGGTGGAGA GATCCCCCGT GGGGCACGCC GACATGGCGG AGGTGGTGTT GAAAATGGCG GATACGCTAA AGGCCGGGGA GGTGGCGGGG AGCCGCTTCT ACTACTTATT CGACGATCTG GTGTGGCTGG ACTTCGCCCT GGCAATGTAC GCCATGGACT ATCTCACGCA GAGGGGGTTT AGGCCGGTGA TACCGCCTTA CATGTTGAAA TTCGACGTGA TACGCCGGGT GCTCGACTTC GACACCTTTA AAGACGCCAT ATATAAGATA GACGGGGAAG ACCTATATCT GATAGCCACG GCGGAGCACG GGATCGCGGC GTATCTCTAC AAGCGCGAAC TCGTCGAGGA GGAGTTGCCA CAGCTCTACG TTGGCTGGTC CCCGTGTTTT AGGAAAGAGG CGGGGGCAGG CAATAGGGAT CTAAAAGGCA TTTTCAGGGT GCACATCTTC CACAAGGTTG AGCAGTTCGT CTTCTCCCTC CCCGAGGAGT CGTGGAAGTG GCACGAGGAG ATTACAAAGA ACACCGAGGA GCTGATAAGG GGCCTGGGCC TCCCCTACAG GGTAGTGAAC ATCTGCGCCC ACGACCTCGG CGCCCCCGCG GCGAAGAAAT ACGACATAGA GGTGTGGTAC CCCGCCCAGG GGATGTACAG GGAGCTGGCC AGTTGTTCCA ACGTGACGGA TTGGCAGTCC TACCGGCTTG GGATAAGGGT GACCAGGAAG GGGATGAAGC GGGAGTTCGT CCACACCCTC AACTGCACCG GCCTCGCAAC CACCCGCACA ATCACCGCCA TACTGGAGAA CTTCCAGCGG GAGGATGGCG CTGTGGAGAT ACCCAAGGCG CTTAGACCCT ACCTAGAGCC CATAAAGGCG GCTCCTAAAG ACTCAATACT TCCAAGAGGC GTTAAGCGAT AG
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Protein sequence | MAGKSFIDRV GYVTMSYSVL EALRNNPDAV RKVLVARRMD PSLVEKFLGL DERWRQLKKE VDELRHEYNK LSREGARAPP ERRRELVERA KELAARLEKV EKELEDVEKA REEVLWSFPN LIHESVPTCP EGVDSVPVRY WGVVKVANNA AELPRGVDYV VVERSPVGHA DMAEVVLKMA DTLKAGEVAG SRFYYLFDDL VWLDFALAMY AMDYLTQRGF RPVIPPYMLK FDVIRRVLDF DTFKDAIYKI DGEDLYLIAT AEHGIAAYLY KRELVEEELP QLYVGWSPCF RKEAGAGNRD LKGIFRVHIF HKVEQFVFSL PEESWKWHEE ITKNTEELIR GLGLPYRVVN ICAHDLGAPA AKKYDIEVWY PAQGMYRELA SCSNVTDWQS YRLGIRVTRK GMKREFVHTL NCTGLATTRT ITAILENFQR EDGAVEIPKA LRPYLEPIKA APKDSILPRG VKR
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