Gene Pars_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1667 
Symbol 
ID5054317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1504195 
End bp1505586 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content56% 
IMG OID640469208 
Productseryl-tRNA synthetase 
Protein accessionYP_001153870 
Protein GI145591868 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.146167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGGTA AAAGTTTTAT AGATAGGGTA GGCTACGTGA CAATGTCGTA TAGCGTATTA 
GAGGCGCTCA GAAACAACCC AGACGCGGTG AGGAAGGTCT TAGTTGCCAG GAGGATGGAT
CCGTCTCTCG TCGAAAAATT CCTCGGACTA GACGAGCGCT GGAGGCAGTT GAAAAAGGAG
GTGGACGAGC TGAGGCACGA GTATAACAAG CTCTCAAGGG AAGGGGCCAG GGCGCCGCCG
GAGAGGCGCA GGGAATTGGT AGAAAGGGCA AAGGAACTCG CGGCGAGGTT GGAGAAGGTG
GAGAAAGAGT TGGAAGATGT GGAGAAGGCC AGGGAGGAGG TTTTGTGGAG TTTCCCCAAT
CTCATACACG AATCTGTGCC CACATGTCCT GAGGGGGTTG ACTCCGTCCC AGTTAGATAT
TGGGGAGTGG TAAAGGTGGC AAATAACGCG GCTGAACTGC CACGGGGGGT TGACTACGTA
GTGGTGGAGA GATCCCCCGT GGGGCACGCC GACATGGCGG AGGTGGTGTT GAAAATGGCG
GATACGCTAA AGGCCGGGGA GGTGGCGGGG AGCCGCTTCT ACTACTTATT CGACGATCTG
GTGTGGCTGG ACTTCGCCCT GGCAATGTAC GCCATGGACT ATCTCACGCA GAGGGGGTTT
AGGCCGGTGA TACCGCCTTA CATGTTGAAA TTCGACGTGA TACGCCGGGT GCTCGACTTC
GACACCTTTA AAGACGCCAT ATATAAGATA GACGGGGAAG ACCTATATCT GATAGCCACG
GCGGAGCACG GGATCGCGGC GTATCTCTAC AAGCGCGAAC TCGTCGAGGA GGAGTTGCCA
CAGCTCTACG TTGGCTGGTC CCCGTGTTTT AGGAAAGAGG CGGGGGCAGG CAATAGGGAT
CTAAAAGGCA TTTTCAGGGT GCACATCTTC CACAAGGTTG AGCAGTTCGT CTTCTCCCTC
CCCGAGGAGT CGTGGAAGTG GCACGAGGAG ATTACAAAGA ACACCGAGGA GCTGATAAGG
GGCCTGGGCC TCCCCTACAG GGTAGTGAAC ATCTGCGCCC ACGACCTCGG CGCCCCCGCG
GCGAAGAAAT ACGACATAGA GGTGTGGTAC CCCGCCCAGG GGATGTACAG GGAGCTGGCC
AGTTGTTCCA ACGTGACGGA TTGGCAGTCC TACCGGCTTG GGATAAGGGT GACCAGGAAG
GGGATGAAGC GGGAGTTCGT CCACACCCTC AACTGCACCG GCCTCGCAAC CACCCGCACA
ATCACCGCCA TACTGGAGAA CTTCCAGCGG GAGGATGGCG CTGTGGAGAT ACCCAAGGCG
CTTAGACCCT ACCTAGAGCC CATAAAGGCG GCTCCTAAAG ACTCAATACT TCCAAGAGGC
GTTAAGCGAT AG
 
Protein sequence
MAGKSFIDRV GYVTMSYSVL EALRNNPDAV RKVLVARRMD PSLVEKFLGL DERWRQLKKE 
VDELRHEYNK LSREGARAPP ERRRELVERA KELAARLEKV EKELEDVEKA REEVLWSFPN
LIHESVPTCP EGVDSVPVRY WGVVKVANNA AELPRGVDYV VVERSPVGHA DMAEVVLKMA
DTLKAGEVAG SRFYYLFDDL VWLDFALAMY AMDYLTQRGF RPVIPPYMLK FDVIRRVLDF
DTFKDAIYKI DGEDLYLIAT AEHGIAAYLY KRELVEEELP QLYVGWSPCF RKEAGAGNRD
LKGIFRVHIF HKVEQFVFSL PEESWKWHEE ITKNTEELIR GLGLPYRVVN ICAHDLGAPA
AKKYDIEVWY PAQGMYRELA SCSNVTDWQS YRLGIRVTRK GMKREFVHTL NCTGLATTRT
ITAILENFQR EDGAVEIPKA LRPYLEPIKA APKDSILPRG VKR