Gene Pars_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1645 
Symbol 
ID5056188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1484044 
End bp1484715 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID640469188 
Producthypothetical protein 
Protein accessionYP_001153850 
Protein GI145591848 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.787985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTT CGTACCAGGA TATAACGATA TCGTGGCTTG GACACGACTC GTTTAGGATC 
GCTAGGGGCG GGGTCGTAGT ATATGTCGAC CCGTACCAGC TCCAGGTGGG GGAGCCTAAG
GCGGATGTTG TCCTTGTCAC GCATGAGCAC TTCGACCACT GCGACCCGCC CTCGATCCAG
AGGGTGCTAA AGCCCTCGAC TGTGGTAGTG GCGCCTGGTG TGGCCCGCCA GTGCGTGTCC
AAGGCGGCGC GGAACATTGT GGAGATCTCG CCAGGCGAGA CGAGGGAGGT GGGGCCGTTG
AGGGTCGTGG CGTATCCGGC CTACAACCTG AACAAGTTCA GGGACCCGGC TCGGGGGGTG
GTGTTCCACC CCAGGGCCGA CGGGAGGGTG GCTTACCTAA TAGAATGGGG CAGAGTTAGG
ATCTTCCACG CCGGGGACTC GGACTTTGTC CCCGAGTTTA GGGAGGTGAG GGCGGACGTA
GTGCTCGTGC CGGTTTCTGG TGTTTATGTA ATGACGCCGC AGGAGGCGGC GGAGTTTGTA
AATGCGGTTG TGCCGAAGGT GGCGATACCG ATGCACTACG GGTCTATCGT CGCCTCTCGG
AGGGAGGCCG AGGAGTTTAG GCGGCTGGTC AGGCCGGAGG TGCAAGTAGT GATTTTAGAA
CGGGAAATAT AA
 
Protein sequence
MPFSYQDITI SWLGHDSFRI ARGGVVVYVD PYQLQVGEPK ADVVLVTHEH FDHCDPPSIQ 
RVLKPSTVVV APGVARQCVS KAARNIVEIS PGETREVGPL RVVAYPAYNL NKFRDPARGV
VFHPRADGRV AYLIEWGRVR IFHAGDSDFV PEFREVRADV VLVPVSGVYV MTPQEAAEFV
NAVVPKVAIP MHYGSIVASR REAEEFRRLV RPEVQVVILE REI