Gene Pars_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1642 
Symbol 
ID5054942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1481713 
End bp1481970 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content57% 
IMG OID640469182 
ProductpaREP7 
Protein accessionYP_001153847 
Protein GI145591845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.994633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGAA AACTGAGAAA GTGGGGGGAG AACTCCCGCA GGTGGGAGGA GCAAAAACGT 
CTGGAGGCTT CGAGTCGTGG AAGAAGTTTA GAGGATTACG AAAGCCGTTG GGATGAGGCG
AGCAGGCGGT TTGCCCAAAT CGAGGAGGTC CAGCGCGCCT CCGCCGAGGC ACAGTTCAGC
AGATACGTCT GGGACGACCT AAAGGAGGAG ATAAAGATTC GGGGGAGAGG CCGTTCTGCG
GCGGACGAGG AACGCTAA
 
Protein sequence
MGRKLRKWGE NSRRWEEQKR LEASSRGRSL EDYESRWDEA SRRFAQIEEV QRASAEAQFS 
RYVWDDLKEE IKIRGRGRSA ADEER