| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1641 |
|---|
| Symbol | |
|---|
| ID | 5055858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1480946 |
|---|
| End bp | 1481320 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640469181 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001153846 |
|---|
| Protein GI | 145591844 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.810973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCA GGTGGATCTA CGTTGATGTC AATGTCCTGT ACTACTTCTT CACGGCGCAT
CCCGAGTACG GGGAGGGCTC CCGGGAGCTG ATTAAGAAGT ACGTGGGGAG GCTGGCCACC
TCTGCCCTCA CCGCTTGGCT TCTCTACGTC TTGACTCGCG AGGAGGGGGT GGTGGAGGCT
GTGGGGGAGT TGGCGACGCT GCTGCCGCTG GACGCCGAGG TTTTGGGCAG GGCCAGGAGG
CTGTCGAGGC CGAGGGACTT CGAGGACAGG GTGCACCTCG CCACCATGCA GGTCTACGGG
GTGGACACTA TATTGTCCAA CGACGCGGAC TTCGACGAGG CGGGCGTGCA GAGGATTGCG
CCTAGGCGGA AGTAG
|
|---|
| Protein sequence | MRRRWIYVDV NVLYYFFTAH PEYGEGSREL IKKYVGRLAT SALTAWLLYV LTREEGVVEA
VGELATLLPL DAEVLGRARR LSRPRDFEDR VHLATMQVYG VDTILSNDAD FDEAGVQRIA
PRRK
|
|---|
| |