Gene Pars_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1627 
Symbol 
ID5054794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1465125 
End bp1466009 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID640469168 
Producthypothetical protein 
Protein accessionYP_001153833 
Protein GI145591831 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00194583 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG CTGAGGAGGT GAAGAGGGTT TTGTTGGAGA ACCCGGAGAT TTTGGCCGAG 
GCCCTACTCG CCCACCCGGA GGTGGTTTAC CAAGCCCTAG CCAAGCTAGC CCCCTGGGAG
AGACTAGCCA CAAAAGAGGA TATAGAAAAG CTGAGGTCGG AAGTGGCCAC TAAGAAAGAC
CTAGAGACAA TGGCCACGAA AGAAGATCTG GAAAAGCTGA GAGCAGAAAT GGCAACCAAA
GAGGATTTAG AAAAGCTAAG ATCGGAAGTG GCCACCAAGG AGGAGCTGGA AAAGCTGAGG
TCTGAGATGG CCACGAAGTC GGATTTAGAA AAAATGGCCA CGAAAGAAGA TCTTGAAAGA
CTAAAGGCTG TGATGGCCAC CAAGGAGGAT TTAGAGAAAG TGAAAGCGAT GATGGCAACG
AAGGAGGATT TAGAGAGGCT TAGGGAGGAG GTCGACGCCC AGCTGAGGTT TTTGGCTATT
AGGGTGGAGG CGCTTGGGGC TCGGTGGGGT GTTGTCAGCG AGGAGGCTTT TCGGGAGGGG
GTGAGGGAGC TTTTGAAAGA GGCGGGCTAC GCCGTGGAGA AATGGCTTTA CTACGACGGG
GAAGGGTTTA TCTACGGCTA CCCCAGCGAG GTGGAGCTGG ACGTGGTGGT GAAAGACGGC
GTCACGATGG CCGTGGAGAT CGCGTCTAGC TTAAAGAGGG CTGACCTACA CGCCGTGAGG
CGGAAGGCGG AGCTGTACGA AAAGGCGACG GGCAGAAAGG TGGACAGAGT GGTGGTGATC
ACGCCGTACA TCAGCGATAG GAACCCGCCC TACGTCAAGG CCATGGCGGA GAGGCCAGGC
GTAAAGATAA TAACGCCAGA AGAGGCGGCG CAGAAACCGG CGTAA
 
Protein sequence
MSLAEEVKRV LLENPEILAE ALLAHPEVVY QALAKLAPWE RLATKEDIEK LRSEVATKKD 
LETMATKEDL EKLRAEMATK EDLEKLRSEV ATKEELEKLR SEMATKSDLE KMATKEDLER
LKAVMATKED LEKVKAMMAT KEDLERLREE VDAQLRFLAI RVEALGARWG VVSEEAFREG
VRELLKEAGY AVEKWLYYDG EGFIYGYPSE VELDVVVKDG VTMAVEIASS LKRADLHAVR
RKAELYEKAT GRKVDRVVVI TPYISDRNPP YVKAMAERPG VKIITPEEAA QKPA