| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1620 |
|---|
| Symbol | |
|---|
| ID | 5054872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1459607 |
|---|
| End bp | 1460689 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640469161 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001153826 |
|---|
| Protein GI | 145591824 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.131189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGT ACGGCATCAT CCTCGCAGGT GGCTTCGCTA CGAGGCTACG GCCATTGTCG
TACACAAAGC CTAAGCCCCT CTTCCCCGTC CTTGGAAAGC CGGTGATAGA CTGGATTATT
GAGAAGGTAG TAGAGGTAGC CGAGCCCGTG ATCTCGGCGC GGTATCTCTC CTCCATGATC
AGAAGCCACG TCGCCTCCAA GTGGGGTGGA AGAGTTAGAA TTGTGGAGGA GGATAGGCCC
CTGGGCGACG GAGGCGCTGT CGTGAACGTG GTCAAAAGCC TAGGCGTGAA GGGGGCCATT
ACAGTGGCAA ACGGCGATGT GTTTACTGAC ATCTCAATAA AAGATGTGTG GGAATTTCAT
AAAAGAAAGG GCGCCGCAGT GACTATCGCG CTGGTGGAGG TGCCGCCGGA GGAGGTCAGC
CGGTTTGGAA TCGCCCTGTT GGAAGACGAC GGAAGAATTG CGAGATTTGT GGAAAAGCCT
AAAGAGCCTG TGGGGAGCAA CTTGGCCAAC GCCGGGGTCT ACATCTTCGA GCCAGAGGCA
GTGGCTGAGT TCCCAGAGCC CAACGCCGGC GAGTTGAAAA TAGCTAGGCA CATCATCCCC
AGGCTAATGG AGAAGTTCGA TATATACGGC TATGTACACA AGGGCTTGTG GTTTGACATA
GGCACACATA TCGATTACCT AAAGGCGAAC TTCGCAGCGC TTGATAAATG CGGGTCGTGC
AGACCCGCGG CGCCGTCCGG CGTCAAGATT ATCCCCCCAG TCTACATCGG CGAGGATGTG
GCCATAGGTC CAGGTTCGGT AGTGGGGCCC TACGCAGTTA TAGGCAGAGG CAGCAAGTTG
GGTCCCAGTG TCAGGATTAA GGAAAGCGTG TTGATGGACG GCGTAGTGGC CGAGGCTGGG
GCGTACATAG CCAAGTCCAT TATCGGAGAT GGAGTCGTTC TCGGCCGCTG GACTAGGGCA
GTGGAGGCAG TAATAGCAGA CGGCGTCTAC GTCCGCGACG AGATTTACGT GGGCAAGGGG
GCTGCCATAG GGCCGAACCG CGAGGTCGAC CAAGACGTGA AAGACGGCGA GGTGCTACCC
TAG
|
|---|
| Protein sequence | MAEYGIILAG GFATRLRPLS YTKPKPLFPV LGKPVIDWII EKVVEVAEPV ISARYLSSMI
RSHVASKWGG RVRIVEEDRP LGDGGAVVNV VKSLGVKGAI TVANGDVFTD ISIKDVWEFH
KRKGAAVTIA LVEVPPEEVS RFGIALLEDD GRIARFVEKP KEPVGSNLAN AGVYIFEPEA
VAEFPEPNAG ELKIARHIIP RLMEKFDIYG YVHKGLWFDI GTHIDYLKAN FAALDKCGSC
RPAAPSGVKI IPPVYIGEDV AIGPGSVVGP YAVIGRGSKL GPSVRIKESV LMDGVVAEAG
AYIAKSIIGD GVVLGRWTRA VEAVIADGVY VRDEIYVGKG AAIGPNREVD QDVKDGEVLP
|
|---|
| |