Gene Pars_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1610 
Symbol 
ID5054092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1453200 
End bp1453964 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID640469151 
Productradical SAM domain-containing protein 
Protein accessionYP_001153816 
Protein GI145591814 
COG category[R] General function prediction only 
COG ID[COG5014] Predicted Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGATC CACAGAGGTT ACTCCAACTA GTTGAGAAGT ACGCCGTCAA AGTGGAGAGT 
GGCGTGGTGT ATAGGCGGTA CAAGAGGTTC CGCGCAGACA GGTGGTACGG CGGCATCGCC
ACGGCGGATG TGGTTGGTTG CAACCTCCGT TGCGGCATGT GCTGGGCTTG GAGGAACACC
TCCTTCGTCC TCTCAAGCGG CGAGTGGCTG GCGCCAGCCG AAGTGGCCGA GAGGCTAAGG
GGCATAGCGG AGAGGAGGGG CTTCCGACAG GTAAGGGTAT CGGGAGGGGA ACCGCTCATT
GCGCCGGTGC ACCTCCTTCA GGTCATAGAC TCCTTTGCTA AGTATACCTT CATTGTGGAG
ACCAACGGGT TGCTGATAGA CAAGGCCCTG GCTAAGGAGT TGGCGGCGAG GCCCCACGCC
GTTGTGAGAG TGTCAATTAA GGGGGCGACG GCTGAGGAGT TTGTAAAAAT TACTATGTCG
CCCCCTCAGT ACTTCTACAA ACAGCTGGAG GCACTACGCC TTCTTGTAGA AGCCGGCATG
GAGCCGTGCC GTGATGTTTA CCCAGCCGCT ATGTTGGGCT TCTCCACTGC AGAGACTGCT
AGGGAGCTGG AGAAGGCGCT GGCGAAGATA GACCCCAGAC TGGCCGATTG TATAGACGTG
GAATACGTAA TCCTCTATCC CCACGTCGTC AAGCTCATGT CGGCGCGGGG CTTGAAGCCA
ACGAAGGCGG TGACGCCCAG CGGGGTGCCT GCCTTCATGA TATGA
 
Protein sequence
MIDPQRLLQL VEKYAVKVES GVVYRRYKRF RADRWYGGIA TADVVGCNLR CGMCWAWRNT 
SFVLSSGEWL APAEVAERLR GIAERRGFRQ VRVSGGEPLI APVHLLQVID SFAKYTFIVE
TNGLLIDKAL AKELAARPHA VVRVSIKGAT AEEFVKITMS PPQYFYKQLE ALRLLVEAGM
EPCRDVYPAA MLGFSTAETA RELEKALAKI DPRLADCIDV EYVILYPHVV KLMSARGLKP
TKAVTPSGVP AFMI