Gene Pars_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1594 
Symbol 
ID5054121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1444233 
End bp1444574 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content49% 
IMG OID640469135 
Productheat shock protein Hsp20 
Protein accessionYP_001153800 
Protein GI145591798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.386135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGA TCAAGAAAAT GATAGAAGAA CTTTCTAGGT CTTTTCAGAA AATGGTAGAG 
GACTTAAAGA AGGAGTATAG GCTTTCTGAA GAGGGCGAGG AGGTAAAAGT GGAGATCGAC
ATGCCCGGGC TTGAGCCAAG TGATATAGCC CTCTCAGTGA CGAAGGACGG CACCGGGATA
CGCGCCGAGG GCTCCAGGGG TGATAGAAGA TACTCAAAGT TCATCCGCCT ACCCGTGAAG
ATAGACCCCT CCACTGTCTC TGCGCTGTAC AGAAACGGCG TGTTGATAAT AACCGCGAAG
AAGGTAAAGG AGGAGGAAAT AAGGATACCA GTCAGGGGGT AA
 
Protein sequence
MEEIKKMIEE LSRSFQKMVE DLKKEYRLSE EGEEVKVEID MPGLEPSDIA LSVTKDGTGI 
RAEGSRGDRR YSKFIRLPVK IDPSTVSALY RNGVLIITAK KVKEEEIRIP VRG