| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1581 |
|---|
| Symbol | |
|---|
| ID | 5056172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1430605 |
|---|
| End bp | 1431759 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469122 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001153787 |
|---|
| Protein GI | 145591785 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0000122912 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCT TATGCGTGGA TCACATCGTC ATGCTCGCCG CCGGCGACTT CAAGATGAGA
ATTGCCAGGT ACTTGTTGAC AGCCCTGGCT ATAAGCGTCG GTGTCGCCCT AGTGGTGGCG
TTGGCGACTG TGAGCGACGC CGCAAGGAGC TATGTGGAGC AGACCCTGTA CAAGGTATAC
CCTGCCGATG TGATGATGTA CTCCGAGTCT ATAAACATTC CCCAGCGACT ACTCGACGTT
TTGAGAAAAT CTCCATCAAT CGAGTCCGCC GAGGGGATCA TAATAACGAC GGGTCTGTAC
AACGGGAAGG TTGTGTCAAT AGTGGGAATC CCCCTCAAGG ACGTAGATTA CTTTGCCATA
GATCTCATCT CGGGACGCTT GCCGGTCTCC GGCGGCGAGG CCGTTGTGGA GGAGTCCGTG
GAGGCGAGGC CGGGCGACGA GATCACCATC AAGGTCTACT CGGGCGCTCT TGGGGGCGAG
AGGACTTTAA GAGTTAGAGT GGTGGGCGTG ATGAGGAGCT TCTTAAAAGG GTTCATAGGC
GCCTTTCGGC TAAACCTAGT GGTGGTTCCG CTGGACTGGT TGCAACAAAA CCTAGACACA
GGGCCTTTTG TAAACACAGT GTTGATCACC GCCAGGAACA AGGCCGAGGT GAAGGCACTT
TACGCCACGC TTAAAGAGAC TTTTAAAGAC GCCCAGGTCT TTTCGCAAGA AAACCTGCTA
GAGACAGTTA ACCAAGTCTT CAACGCCCTC AACGCCGTGT TTTCCGTAAT TAGCGGCGCG
GCCTTGGCCA CGGCGGCAAT TACAACCTTC GCAGTTATGT CGATTACGAC CAGAGAGAGA
CTTAGGGAAT TTGGCCTTCT TAAAGCAATT GGCATATCGT CTCGCGACAT AACGCTGTCG
GTTGCCGCCG AGGTTATAGC AATAGCTCTG GCGGCTGGGG CCGTCGGCGT GGTGGCGGGC
TTCTACGGCG CAAGTTTTGT GAAACAAATT CTTGTGGGTA TGGGGATAAA CTTCGATATG
CCGATTACGT TTAGGCCTAT CTATGCTACC ATTGGGCTGG CCACAGCCAT CGTCGTAGCC
GCCGTAGGCG CCCTTGTTCC GATGTACAGA GTAGCCAAGT TAAGACCGCT GGAAATTCTA
CGGCTATGGC AGTAG
|
|---|
| Protein sequence | MQRLCVDHIV MLAAGDFKMR IARYLLTALA ISVGVALVVA LATVSDAARS YVEQTLYKVY
PADVMMYSES INIPQRLLDV LRKSPSIESA EGIIITTGLY NGKVVSIVGI PLKDVDYFAI
DLISGRLPVS GGEAVVEESV EARPGDEITI KVYSGALGGE RTLRVRVVGV MRSFLKGFIG
AFRLNLVVVP LDWLQQNLDT GPFVNTVLIT ARNKAEVKAL YATLKETFKD AQVFSQENLL
ETVNQVFNAL NAVFSVISGA ALATAAITTF AVMSITTRER LREFGLLKAI GISSRDITLS
VAAEVIAIAL AAGAVGVVAG FYGASFVKQI LVGMGINFDM PITFRPIYAT IGLATAIVVA
AVGALVPMYR VAKLRPLEIL RLWQ
|
|---|
| |