Gene Pars_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1556 
Symbol 
ID5054115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1408529 
End bp1408999 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID640469097 
Producthypothetical protein 
Protein accessionYP_001153762 
Protein GI145591760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000519203 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATCCC CCTCAGCCAG TAGACTTGTA AAGGCATACC TCGCCGGTGT GGGGATAAAC 
GGTTGCGAGG TCCACAACGT GAAGAACTAC CTTCGGCAGT GGCTACACGG CCTTGGCTAT
GTTGAGGGGT CGAAGGCTGT TATCCCGGCC TCTTATTGCA GATACCGCCC GGCCACTGTG
GTGGAGCACC TATACTTCAT AAAGGGGGCT TTTGAGACAT ACGGCGAGTT TTTCATGGGT
GACCCCCACG GAGGATATCC CATTGTGGTA TTCGAGACTG GTAGCAAAAA GTTGGTGAAG
TCGCTGAGGC TCATAGGCGT GAGGCCCCTA GTTACCACAG ACGAGACCCG CCGGCGCAGG
TTCGTAGTTA TATACGACAG GCGCGACATC AAGCTTTTTG TAAAGATGGT AAAACCCGTG
GTGGATGATC CCCACGTCGC CGTTGCCCTG GGGCTATGCA AGCGGATATA G
 
Protein sequence
MSSPSASRLV KAYLAGVGIN GCEVHNVKNY LRQWLHGLGY VEGSKAVIPA SYCRYRPATV 
VEHLYFIKGA FETYGEFFMG DPHGGYPIVV FETGSKKLVK SLRLIGVRPL VTTDETRRRR
FVVIYDRRDI KLFVKMVKPV VDDPHVAVAL GLCKRI