Gene Pars_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1542 
Symbol 
ID5054168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1398067 
End bp1398672 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content59% 
IMG OID640469083 
Producthypothetical protein 
Protein accessionYP_001153748 
Protein GI145591746 
COG category[R] General function prediction only 
COG ID[COG1634] Uncharacterized Rossmann fold enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.034899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTTCG ACCCACCTGA GTGGCTATAT GTCTACACCA TGGCCCAAGC CGTCCTCCCC 
CAGCTCTCCT ATCACAAAGA CCGCGAGGCG GCGGAGACAG CCAGCCACAT GCCCGGCCTC
CCAGTGGATG TACTAAGGGA CTTCGACTGG GGGAGCCCCG CCGTATATAT GCCTCCCTTC
GAAAAGGTTG TAGGCGGTAG CCTCGTGGTG GCGGTGGAGG GATACACCGC CAAGAAGCTG
GCAAGGCGGG GAGTGAAGCC GGATGTCGTC GTAGGCGACT GGGATTTCGA GCCTGAGGGA
GCGGCGCTGG GGAGGATTGC GGTCGTCCAC GCGCATGGCG ACAACTACTG GCGACTCCCT
CGCGGGCCGT ATATATACAC GGTGCAGACC TGGCCTGTTG GTTGTACGGC AAATGTGTCG
GGTTTTACCG ACGGCGACAG GGCTGTCTAC CTCGCCTACT ACATGGGCGC CAGGGAGATA
ACAGTCAGCG GCTTCTACCC ACACGTCTCC GTTAAGCGAG ACGACGAGGC GAAGAGGAAG
AAGCTTAAAA TTGCGGCGCA CCTACTCGAG AGGCTGGCCA GAAGAATTTC CATAAGATTT
TTGTAG
 
Protein sequence
MIFDPPEWLY VYTMAQAVLP QLSYHKDREA AETASHMPGL PVDVLRDFDW GSPAVYMPPF 
EKVVGGSLVV AVEGYTAKKL ARRGVKPDVV VGDWDFEPEG AALGRIAVVH AHGDNYWRLP
RGPYIYTVQT WPVGCTANVS GFTDGDRAVY LAYYMGAREI TVSGFYPHVS VKRDDEAKRK
KLKIAAHLLE RLARRISIRF L