Gene Pars_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1539 
Symbol 
ID5054692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1396288 
End bp1396599 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content54% 
IMG OID640469080 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001153745 
Protein GI145591743 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.234612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATAA CAGTGTTTAT CACAGCCCCT GATAAGGAAA GCGGTAAGAA GATCGCCAGG 
CACATCCTCG AAAAGAGGCT CGCCGCTTGT GTCAACATGA CGCCGGTGAG CTCAATGTAC
TGGTGGGAAG GCAAGCTCGA GGAGTCAGAC GAGGTACTCC TCATTGCGAA GACCACAACT
GACAAGCTGG AGGAGCTCGT GAAGGAGGCT AAGGCAGTGC ACCCCTACCA AGTGCCTGAA
ATAATCGCAG TGCCCATCGT GGGGGGTTAC AAGGAGTATT TAGGCTGGGT GGAGCGGGAG
ACCCATGCCT AG
 
Protein sequence
MYITVFITAP DKESGKKIAR HILEKRLAAC VNMTPVSSMY WWEGKLEESD EVLLIAKTTT 
DKLEELVKEA KAVHPYQVPE IIAVPIVGGY KEYLGWVERE THA