Gene Pars_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1534 
Symbol 
ID5054097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1391851 
End bp1392567 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content56% 
IMG OID640469075 
Productthreonyl/alanyl tRNA synthetase, SAD 
Protein accessionYP_001153740 
Protein GI145591738 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.11001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACTA AGTTGTTGTA CCAGGAGGAT TCTTACTTGA AAGAGGCCGA GGCTACTGTG 
CTGGAGATAT CCGGCAACGA GGTGGTGCTG GACAAGACCG TGTTCCACGA CGGCGCAGGC
GGCGTGGCGG CGGATAGCGG CTACATCGTC TACGGAGGCG AGAGGTACTC CGCCATCGCC
GCGCACAAGG GCGGCGAGGT CGTACATGTT CTTGACAGAG CCCCCAGCTT CAAGCCAGGG
GACGTTGTGG TAGGAGTGGT GCACTGGGAG AAGCGGTATA GGAAAATGAG GCTCCACACG
GCAGCGCACA TACTATCCGC CGTTTTGTAC AACAGGCACG GGGCATTGAT CACCGGGGGC
GATATCACGC ACGAGTATGC GCGGGACGAC TTCAATGTGG AGGGGGACAT GGCGACTGTT
AGGAAAATTT TCGAAGAGGC TGTGGCTGAG GTTAACGAAA TTGCCGCAAG GGGGATCGAG
GTGAAGGTAT ACTGGCTCCC GCGGGAGGAG GCGCTGAAAA TACCAGGGGT TGTTAAGCTA
GCGGAGAAGA TGCCGCCAGA CATCCCAACT CTGCGTATTG TAGAAATACC GGGTGTAGAC
ATCCAGGCAG ATGGAGGGCC ACATGTTCGG AACACAAAGG AGATTGGCAC GGTGAAAATT
CTGAAAGTGG AAAACAGAGG CAAGGGCAAG AAGAGGTTGT ACTACACAGT GGAGTAG
 
Protein sequence
MRTKLLYQED SYLKEAEATV LEISGNEVVL DKTVFHDGAG GVAADSGYIV YGGERYSAIA 
AHKGGEVVHV LDRAPSFKPG DVVVGVVHWE KRYRKMRLHT AAHILSAVLY NRHGALITGG
DITHEYARDD FNVEGDMATV RKIFEEAVAE VNEIAARGIE VKVYWLPREE ALKIPGVVKL
AEKMPPDIPT LRIVEIPGVD IQADGGPHVR NTKEIGTVKI LKVENRGKGK KRLYYTVE