Gene Pars_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1527 
Symbol 
ID5054820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1385591 
End bp1386841 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content61% 
IMG OID640469068 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001153733 
Protein GI145591731 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.246642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACT TCGTCGTCGT GGGGGCCGGC ATCGTCGGCG TGGCCACGGC CTACCACCTA 
AAACGCCTCT CGCCCCGTTC TAGAGTTTTG GTAATTGACC AACACCCAGG AGTTGGGATG
GGGGACACCG CAAAGTCGGC GGCGGCGTTT CGAACCGCCT TCACTTCTTG GGTAAACCGC
GTCTTGGCTA AGACCAGTGT GGGGTTCTAC CGCGAAGTCC AAGAGGGTGG GGTTGATCTT
GGAATGAGGT TTGTGGGTTA CCTCTTTCTT GTCCCTCAAG AAAACGCGGA GGCTATGCTC
AAGGTGGCCG AGGAGCTGAG GGGCATGGGC TCCGCCGTGG AGCTGTACCG CGAGCTGGGC
AGGTCTGTGA GGTTTAGGGT TTCCGACGAC GAGGAGGCCA GGGAGATGGG GCTTCCAGAC
GTTGCCTTGG GGTTGCTAGT CAAGGAGGCC GGCATCATGG ACCCGGAGAA GCTGGTGAAG
TACTACTACG AGGAGTACAG CAAGATGGGC GGCGAGGTCT TGTTCAACAC CAAGGCGCTG
GGGGTGGTCT TTGCGCCTAA GAAGCCGCTG GGCATCCCAG GGGAGCCCTT CCCCTGGCAG
GAAGTGAGAG CCGCCGGCGT GGAGACAAGC GCGGGGGTCA TAGAAGCGAA GAACGTCATA
ATCGCCACGG GGGCCTGGAC TGAGAGGTTT ATGGACGCGG CGGGCTTTGG ACTGCCGCTT
AAGCCTAGGA AGAGGCAGGT CTTCGTGGTG AAGGCAGACG GCGAGCTTCG GCAACTACTA
GAAACGGGGC TGGCCGACAG GGAATACGGC CCCATGATAA TCCTCCCCAA GGGGGTGTAC
ATGCGGCCAG AGCCGGGGGA GGGGACCTAC TGGATTGGTG TGGCCGACAG GAGGCCCTTC
GGCTTCGAGG AGGAGCCCCA GGCGGAGGAG CAGTTGTGGC GGTACGGGAT ATACCCAGTG
TTGACGAAGT ATGTCCCAGC CGCCGAGGGC CGGGCGCCTC AGAACGCGTG GGCTGGGCAC
TACGACGAGA ACGTGGTGGA CTACCAGCCT GTTGTCGATC GCCTCGCCGA GGGGCTGTAC
GTGGCTGCCG GGACGAGCGG CTCTGGGATT ATGAAGGCAG ACGCCATAGG GCGCATCGCC
GCGTATCTAG CCCTGGGTTA TGGAAAGGCT GAGCTTTATG GCGGGGTGGT GGTGGACAGC
AACGTCCTTC GTCATAATAG GTGTTTCGAG GAGGAGCGGC TGGTGATTTA A
 
Protein sequence
MYDFVVVGAG IVGVATAYHL KRLSPRSRVL VIDQHPGVGM GDTAKSAAAF RTAFTSWVNR 
VLAKTSVGFY REVQEGGVDL GMRFVGYLFL VPQENAEAML KVAEELRGMG SAVELYRELG
RSVRFRVSDD EEAREMGLPD VALGLLVKEA GIMDPEKLVK YYYEEYSKMG GEVLFNTKAL
GVVFAPKKPL GIPGEPFPWQ EVRAAGVETS AGVIEAKNVI IATGAWTERF MDAAGFGLPL
KPRKRQVFVV KADGELRQLL ETGLADREYG PMIILPKGVY MRPEPGEGTY WIGVADRRPF
GFEEEPQAEE QLWRYGIYPV LTKYVPAAEG RAPQNAWAGH YDENVVDYQP VVDRLAEGLY
VAAGTSGSGI MKADAIGRIA AYLALGYGKA ELYGGVVVDS NVLRHNRCFE EERLVI