Gene Pars_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1512 
Symbol 
ID5054091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1370234 
End bp1371121 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content57% 
IMG OID640469054 
Producthypothetical protein 
Protein accessionYP_001153720 
Protein GI145591718 
COG category[S] Function unknown 
COG ID[COG1673] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.223657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACT ATTGGCTTAC CATGCTCGAC GAGGATAATT TCAGGTATAC GGTCGAAAGG 
GGCATCTATG GGCTACCGGA AGGCGCCGGC GATGAGGCCA AGTTGATAAA GCCGGGAGAT
AGGCTCGTGG TGTACATAAT GAAGAAGGGC TGTAGGGAGT TATGCCAATC CTTCACCGCG
GTGCTGGAGG TAGCCGGCGA GTGGCAGAGA TCAAAAAAGC CGACGTGGCC GGACGAGGTG
AGGGAAGGCC GCGTCAAATA TCCGTGGGTG GTCAACGTCA AGGTGCTGAT AATGGGGAAG
GTGGAATTCG CAAAGATCAA GGAGAAACTG CAAAGGCTTC TGGGCATTGG GGATCTTGAC
CCGAGTAGGC TACGTCTCTA CGCCCTGTAC TACGCAAGAC GTCCCTTGCC GCCGGGTGTC
GGCGAGTTGG TAGAAGCGGA GTTGCGCAAG TCGGCGGCCG CGGAAATGCG CACTCACGAC
AAGCTAGTAG ACATCCTCGT GGAGGTTGGG CGATGGCTCG GGTTTAGGGC GGTAAAGGAG
TACCGAATCG ACAATTTCAG AGTCGACGTT GCGTTTTTCA AGCCGCCGAG GACGACGCCG
TTCGCAGTCG CCGAGGTGCA CGTGGGAGGC GACGTGTATA AGGACTTGGC CGCGCTGAAA
CACGCCTACG ACCGCTACGG CTCCAAGCTC GTCTACGTGC TGGCGAGGGA TGAGGAACAA
GTCGCCAAGT TGCTAAACGA GGCGTTGCAA GGAGCCTTCC ACGAGATAGG GGAGCACATC
GCAGTGGTAA AGGCAGAGGA GCTCCACGAG CTACACGAAA CGCTGAAACT TGCAGGTGTC
AAGGGGCTCC TTAAGCAACT TGAAGTAGCT AAGCCGGCCG ATTTTTAG
 
Protein sequence
MPDYWLTMLD EDNFRYTVER GIYGLPEGAG DEAKLIKPGD RLVVYIMKKG CRELCQSFTA 
VLEVAGEWQR SKKPTWPDEV REGRVKYPWV VNVKVLIMGK VEFAKIKEKL QRLLGIGDLD
PSRLRLYALY YARRPLPPGV GELVEAELRK SAAAEMRTHD KLVDILVEVG RWLGFRAVKE
YRIDNFRVDV AFFKPPRTTP FAVAEVHVGG DVYKDLAALK HAYDRYGSKL VYVLARDEEQ
VAKLLNEALQ GAFHEIGEHI AVVKAEELHE LHETLKLAGV KGLLKQLEVA KPADF