Gene Pars_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1508 
Symbol 
ID5055846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1366257 
End bp1366997 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID640469050 
Productsulfate ABC transporter, permease protein, putative 
Protein accessionYP_001153716 
Protein GI145591714 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.817545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCGC TCTTGTTTTT GGCTGTTGGG GCGGCAGGTT TGCTTTTGAT GTTGTTGGTG 
TTTTTGCCTA TTTATTTCGT GACGTGGTCT ATGCCTCCTG GCTTTTTTGA GGCTTTTCTG
TATACTGCTC TTTTCGGCGC GGCCGCCGCT GCGCTTTCCC TATTGCCGGG CCTGGCGGCT
GCGCTGGCAT CAAGGAGGGG GGGCGTCGTG GGCGCGCTTT CCCAGGTGTT GTACGTACCT
GCGGTGGTGC CCCCGACATC TGTGGGGGTT TTGTTGCTGG CGTCTTTCAA CCTGCCGCGG
GCTCTCTGCA TAAATGGCGT CGGGGCCTTC TGCCCTTTGA GGGACCTCCC GGCATATGTG
GTGAACCAAC CTCTGGGCGT CCTTATCGCC ATGACGGTGA TGGCTCTGCC CGTGTCATAC
GCAGTTTTCG AGGGGGCGCT GAGGGAGGAG AGGGCTGAGC TCTATTTCCG ATCGCTGGGC
TTTTCCGGTT TTTCTCTGTT GTTCATGATT CTGCTGTCTA TGCGCCGCGC TGCCCTCACA
GCCTTCGTCT TTGCTTGGGT TAGGAGCTTC GGCGAGCTGG GGGTGTTGCT CGTATTTGCG
TCGTATCCCG TAACGGCGTC GATATACATC TACAACGCTT GGCTGACCTA CGGCGTGGGA
GCCGCCGTGG GGGCTTCCCT GGCCACTGCC CTGGTGTCGA TTGGGGTTGC CTACTTGGCG
AGATGGCGTC TCTCAAAGTA G
 
Protein sequence
MDALLFLAVG AAGLLLMLLV FLPIYFVTWS MPPGFFEAFL YTALFGAAAA ALSLLPGLAA 
ALASRRGGVV GALSQVLYVP AVVPPTSVGV LLLASFNLPR ALCINGVGAF CPLRDLPAYV
VNQPLGVLIA MTVMALPVSY AVFEGALREE RAELYFRSLG FSGFSLLFMI LLSMRRAALT
AFVFAWVRSF GELGVLLVFA SYPVTASIYI YNAWLTYGVG AAVGASLATA LVSIGVAYLA
RWRLSK