Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1505 |
Symbol | |
ID | 5055126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1364196 |
End bp | 1365311 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640469047 |
Product | inner-membrane translocator |
Protein accession | YP_001153713 |
Protein GI | 145591711 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0667876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCAGT TCGTAGGGCT CATAATATAC GCCCTAAGCG TGGCGGCAGT CGCCGCCGCC GGCCGCGACG TCCAGAGCTA CTTGCTCACT ACAATAGTCG ACGTCGCCAT ATACCTGATA ATAACCCTCT CGCTCAACCT CGAGGCCGGG ATAGGGGGGA TACCCAACTT CGGGAGGGTC CTCACAGTCG CCTTCGGCGC GTACATGGCC GGAGGGGTAA TTGGGCGGAT TGCGCTGTGG GCTAAGGGCA TGAGCTACGA CTACATCTAC GACAACGCCG CGGCGGTCTC CGCCTTGTCC AAGTCTATGA CCGCCGTAGA CGCGGCGGCG ATGCTGGCGC TGGGAGTGGC GATATCAATC GCCGTCGGGG CGTCCCTGGG GCTAATCGCC TCGCTACCGG CCAGGAGGCT CTCCGCGGAC TACCTCGCCA TAACCCTACT CGCCTTCGGC GACGTGGCGT ACTACATCGG TCTCAACTAC GAGCCTCTGG TAGGCGGCAC CCTCGGCGTC TCCGCGCCTC CAATCTACGA GAAGTTGTTT GGAGGCGGCA CCATGCGGCT CATCGGGGCG GTGGCGGTGT CTGCCGGCGC CGCCTTATTG GTGTACCTAC TTATACAGAG GCTTTCCCAG TCCCCATTTG GCAGAATACT CCGCATACAC AGGGAAGACC CCGAGCTTGT GTCTGTGCTG GGCAGAGACC CCGCCTACAT CAGGGCGTGG ACTATGGCCA TCGGAGGGGC CGTCTCCGCC GTGGCGGGGT TGCTATACGC CCTCTACGCC GGCGCCGTGC ACCCGAGAGG CTTCGAGAGG ATAAACTTCA CCTTCTACCC CTGGCTCATA ATGATACTCG GCGGCATGGG CAACAACCTA GGCGTAGTCA ACGGCGTATT CATCTTTGTT GTGATATACA GGATTCTAGA CATCTTCAAG TACGAAATAG GAAACGCCGT GGGGTTCGAC CCAGTGTGGC TAGGCTACAT GCTATTCGGC GGGCTGGCCA TGTTGGTCAT AGCCCTCGCC CCCCGCGGAC TAGTCCCAGA AAAAGCCGAG CCCGTAGTAG GCGGAAGAAG AGTCACTCCC CCACCACAAG GTCAAACTCA GAGCCGTCGA GAATAA
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Protein sequence | MRQFVGLIIY ALSVAAVAAA GRDVQSYLLT TIVDVAIYLI ITLSLNLEAG IGGIPNFGRV LTVAFGAYMA GGVIGRIALW AKGMSYDYIY DNAAAVSALS KSMTAVDAAA MLALGVAISI AVGASLGLIA SLPARRLSAD YLAITLLAFG DVAYYIGLNY EPLVGGTLGV SAPPIYEKLF GGGTMRLIGA VAVSAGAALL VYLLIQRLSQ SPFGRILRIH REDPELVSVL GRDPAYIRAW TMAIGGAVSA VAGLLYALYA GAVHPRGFER INFTFYPWLI MILGGMGNNL GVVNGVFIFV VIYRILDIFK YEIGNAVGFD PVWLGYMLFG GLAMLVIALA PRGLVPEKAE PVVGGRRVTP PPQGQTQSRR E
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