Gene Pars_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1505 
Symbol 
ID5055126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1364196 
End bp1365311 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content60% 
IMG OID640469047 
Productinner-membrane translocator 
Protein accessionYP_001153713 
Protein GI145591711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0667876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGT TCGTAGGGCT CATAATATAC GCCCTAAGCG TGGCGGCAGT CGCCGCCGCC 
GGCCGCGACG TCCAGAGCTA CTTGCTCACT ACAATAGTCG ACGTCGCCAT ATACCTGATA
ATAACCCTCT CGCTCAACCT CGAGGCCGGG ATAGGGGGGA TACCCAACTT CGGGAGGGTC
CTCACAGTCG CCTTCGGCGC GTACATGGCC GGAGGGGTAA TTGGGCGGAT TGCGCTGTGG
GCTAAGGGCA TGAGCTACGA CTACATCTAC GACAACGCCG CGGCGGTCTC CGCCTTGTCC
AAGTCTATGA CCGCCGTAGA CGCGGCGGCG ATGCTGGCGC TGGGAGTGGC GATATCAATC
GCCGTCGGGG CGTCCCTGGG GCTAATCGCC TCGCTACCGG CCAGGAGGCT CTCCGCGGAC
TACCTCGCCA TAACCCTACT CGCCTTCGGC GACGTGGCGT ACTACATCGG TCTCAACTAC
GAGCCTCTGG TAGGCGGCAC CCTCGGCGTC TCCGCGCCTC CAATCTACGA GAAGTTGTTT
GGAGGCGGCA CCATGCGGCT CATCGGGGCG GTGGCGGTGT CTGCCGGCGC CGCCTTATTG
GTGTACCTAC TTATACAGAG GCTTTCCCAG TCCCCATTTG GCAGAATACT CCGCATACAC
AGGGAAGACC CCGAGCTTGT GTCTGTGCTG GGCAGAGACC CCGCCTACAT CAGGGCGTGG
ACTATGGCCA TCGGAGGGGC CGTCTCCGCC GTGGCGGGGT TGCTATACGC CCTCTACGCC
GGCGCCGTGC ACCCGAGAGG CTTCGAGAGG ATAAACTTCA CCTTCTACCC CTGGCTCATA
ATGATACTCG GCGGCATGGG CAACAACCTA GGCGTAGTCA ACGGCGTATT CATCTTTGTT
GTGATATACA GGATTCTAGA CATCTTCAAG TACGAAATAG GAAACGCCGT GGGGTTCGAC
CCAGTGTGGC TAGGCTACAT GCTATTCGGC GGGCTGGCCA TGTTGGTCAT AGCCCTCGCC
CCCCGCGGAC TAGTCCCAGA AAAAGCCGAG CCCGTAGTAG GCGGAAGAAG AGTCACTCCC
CCACCACAAG GTCAAACTCA GAGCCGTCGA GAATAA
 
Protein sequence
MRQFVGLIIY ALSVAAVAAA GRDVQSYLLT TIVDVAIYLI ITLSLNLEAG IGGIPNFGRV 
LTVAFGAYMA GGVIGRIALW AKGMSYDYIY DNAAAVSALS KSMTAVDAAA MLALGVAISI
AVGASLGLIA SLPARRLSAD YLAITLLAFG DVAYYIGLNY EPLVGGTLGV SAPPIYEKLF
GGGTMRLIGA VAVSAGAALL VYLLIQRLSQ SPFGRILRIH REDPELVSVL GRDPAYIRAW
TMAIGGAVSA VAGLLYALYA GAVHPRGFER INFTFYPWLI MILGGMGNNL GVVNGVFIFV
VIYRILDIFK YEIGNAVGFD PVWLGYMLFG GLAMLVIALA PRGLVPEKAE PVVGGRRVTP
PPQGQTQSRR E