Gene Pars_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1485 
Symbol 
ID5056291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1344653 
End bp1345804 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content55% 
IMG OID640469025 
Productcystathionine gamma-synthase 
Protein accessionYP_001153694 
Protein GI145591692 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.923651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGGG GGACGGTGGC GGTTAGGGGG TATAGAAATC TTGACCAGTT GGGGTCTGTA 
CAGCCGCCGA TATACTTGGC TGCCTTGTTT AGAATGGAGG GAGAGGCTAG GAAGTCGGAT
CGTGGGTTTG ACTTGAAGTA CAGCCGGGAG GAGAACCCCA CTCTCCGACC GCTGGAGGAG
GTAGTTGCGA GGCTTGAGGG CGGCGTAGAT GCGCTGGCTT TTAACAGCGG GATGGCGGCG
CTTTCTACTG TGTTTTTTTC GTTGCTGTCG GCAGACTCCT CTGTTTTGGT ACCTATGGAG
GCGTACGGCG CCACTCTTAG GCTTCTCAGT TCACTTGTGA AATTTGGTGT TAGGCTCAGG
AGGGCGTATC CAGACACCGA GGCCTACATC GAGATGTTGA AGGCGTCTAG GCCTAATGTT
GTGTTTTTTG AAACTATTAC AAACCCCATG CTTAGAGTGC TTGACGGCCC CGAGATTGTG
AAGACGGCTA AGGACTTGGG CGCCTCCGTG GTGGTGGACA ACACCTTTGC TACCCCTATT
TTAACCACGC CGCTGTCATA CGGTGCAGAC GTTGTGGTAC ACTCAGCGAC TAAGTACATA
GCTGGTCACA ACGACGTGGT GGGGGGTGTC GCCGTCGTGT CAAGCCGGAG TCTGCTAGAG
GAATTGTGGG TCTGGAGGGC TATGCTCGGC GGCATTATGC AACCCTTCGA GGCTTACCTA
ACCCTGAGGG GGGTGAAGAC TTTGTTTGTC AGGTTTGAGA AGCAGTGCAG GAACGCAATG
GCGGTGGCGC AGTTTCTCGA GGGGCACGGC AAGGTGGCTG AGGTGTTCTA CCCCGGTTTG
CCCAGCCACC CGCACCACTC GGTTGCCAAG AAGCTATTTG GCGACAAGTT CGGCGCCGTA
GTCTCTTTTC GCATCAAAGG CGGTAGGGAC GCCGTGCTGA AGTTTTTCAA GTCTTTGAGA
CTTATAATAC CTGGGCCGAG CCTTGGGGGG GTTGAGAGCA TAGCAACTTA CCCCGTCGCC
AGCGCCGCCT CGCCTATTCC AGAAGAGGAT AGGAAAGTGC TAGGAATTAC TGAAGACCTT
GTGAGGCTCT CGGTGGGTCT GGAGGACGTG GAGGATCTAG TAGAAGATCT CGACAGGGCG
CTTAATAGCT AG
 
Protein sequence
MRRGTVAVRG YRNLDQLGSV QPPIYLAALF RMEGEARKSD RGFDLKYSRE ENPTLRPLEE 
VVARLEGGVD ALAFNSGMAA LSTVFFSLLS ADSSVLVPME AYGATLRLLS SLVKFGVRLR
RAYPDTEAYI EMLKASRPNV VFFETITNPM LRVLDGPEIV KTAKDLGASV VVDNTFATPI
LTTPLSYGAD VVVHSATKYI AGHNDVVGGV AVVSSRSLLE ELWVWRAMLG GIMQPFEAYL
TLRGVKTLFV RFEKQCRNAM AVAQFLEGHG KVAEVFYPGL PSHPHHSVAK KLFGDKFGAV
VSFRIKGGRD AVLKFFKSLR LIIPGPSLGG VESIATYPVA SAASPIPEED RKVLGITEDL
VRLSVGLEDV EDLVEDLDRA LNS