Gene Pars_1431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1431 
Symbol 
ID5054996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1289422 
End bp1290558 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content54% 
IMG OID640468972 
Producthypothetical protein 
Protein accessionYP_001153641 
Protein GI145591639 
COG category[S] Function unknown 
COG ID[COG3372] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.813641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00133471 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATACCAA TAGACTACCT CCGAGTGGCG AAGAGGGGAA GGGAGGTAAA GCCAAAGTAC 
CTACGCGACG AGAGGGCGGC GGCAGAGGTG ATCCAGGTAG CCAAGTCCGC TAAGACAGTT
GGGCAGTTTA GAAAGGCGGC TGAGGCGACG AGCCCCGACA AAAAGCTCTC AAGAGGGTTG
GCGCATCTAC TAGAGCGGCA TATGGAGTTG GAGAAACTCG ATGCCAAGCT AGTCGCCAGG
GTGAGGATGG AGGTTTTCAA AACAGCATCG CAAAGAGGCT ACCCCCTAAC GCCTGAAGAG
AGGGAAGAAA TTTTTCGCCT CGTAGCGTCA AGGCTGGGTC TAGGCGTTGA CGAGGTGAAG
AAGTTATTCC TAAAGGCCTA CGAAGAGAAT AGGGAAATCG TAAAGCTCCC AGACATCGGA
CCCGATGACT TGACAAGACT TTACAACCTG GCGCTTATAC AGGCACTTCT TTTCAAGTCG
CTATACGTAA AGGCCAAGCT CCCCAACTCG CCTACTCACA TCAAGAGCTT GATAAGAGCC
GTCAAGGGCT ACCGCCTAAT GTATATTGCT GAGGCTAGAG GCCAATTCCT TGAGTTCGCC
TTCGACGGCC CTGTGTCCGC GTTGCGGCAG ACCGAGAGGT ACGGGACTAG GCTAGCGAAA
CTCGTGCCAT ATATCACCTC GGCTGATCGG TGGGAGATAG AGGCGGAGGT GAAGGTGGGG
GAGAGGAAGT ACCTTTTTAG AGAAAGCTGG GAGACCGCCC CGCCCCTGCC CAAAGTTGCC
GTAGAGGCGG AGGAGTTTGA CAGCTCGATA GAGCTGGAGT TCTACCGACA GGTTTCGAGG
CTCTGCAAAG TGGAGAGGGA GCCCGAGGCT ATTGTGGTAG ACGGGAGGAT ATACATCCCC
GACTTCAAAA TAGGCGACCT ATACGTGGAG ATAGTCGGCT TCTGGACGCC GGACTACCTC
AAACGAAAAT ACGAGAAGGT GGTGAAGGCG GGGAAGCCCA TCTTAGTCCT CGTGGCGGAG
GAGTTAGCAA TGGCCACTTG GAAGGAGCTT ATGCCAAACG TAGTGATTTT TAAAGGGAGG
CCGAGGCTAA GCGATGTGTA TAAGTACATA AAGCCTTACT GCTCTGCCAG GCGTTAG
 
Protein sequence
MIPIDYLRVA KRGREVKPKY LRDERAAAEV IQVAKSAKTV GQFRKAAEAT SPDKKLSRGL 
AHLLERHMEL EKLDAKLVAR VRMEVFKTAS QRGYPLTPEE REEIFRLVAS RLGLGVDEVK
KLFLKAYEEN REIVKLPDIG PDDLTRLYNL ALIQALLFKS LYVKAKLPNS PTHIKSLIRA
VKGYRLMYIA EARGQFLEFA FDGPVSALRQ TERYGTRLAK LVPYITSADR WEIEAEVKVG
ERKYLFRESW ETAPPLPKVA VEAEEFDSSI ELEFYRQVSR LCKVEREPEA IVVDGRIYIP
DFKIGDLYVE IVGFWTPDYL KRKYEKVVKA GKPILVLVAE ELAMATWKEL MPNVVIFKGR
PRLSDVYKYI KPYCSARR