| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1418 |
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| Symbol | |
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| ID | 5056425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1278824 |
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| End bp | 1280053 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640468959 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001153628 |
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| Protein GI | 145591626 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.955959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.212378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAGACA GGTGGTACAA CATCGCCGCT GACCTCCCCG CTGTCTTGGC TCCTCCCAAA
GACCCAGACG AGGGCGAGAG TAGAATCGGC CTGCTTACGA GAATACTCCC ATCCGCGCTT
ATAGACCAAG AATTTTCTGC AGAGCGCTGG ATTACTGTTC CAGAAGAGGT TAGAGACGCG
TACCGGCGTG TTGGTAGGCC GACGCCCCTC CTCCGCGCCG AGGGGCTGGA GAGGGCTCTG
GGCACGGGGG TGAGGATATA CTACAAGTAC GAGGGGGTGC TCCCAGTGGG TAGCCACAAG
CTCAACACTG CCCTGGCACA GGCCTACTAC GCCAAGGCCG ACGGCGCGGT GGAAGTGGCC
ACCGAGACGG GGGCGGGGCA GTGGGGCATG GCTGTCTCCC TCGCGGCTGC TCTCTTCGGC
CTAAAGGCAG TGGTGTTTAT GACCCGCTCC TCCTACAACT CAAAGAGGCA GAGGCTGACC
TTTATGAGGA CTTACGGCGC GACGGTGTAC CCCAGCCCCA GCGAAGTGAC GGAGGCGGGG
AGGAGGCATT ACCGGCCGGA CCACCCAGGC TCGCTGGGGA TCGCAATATC GGAGGCAGTG
GAGTACGTCC TATCCGGCGA GAAGAGGCAC TACCTTCCGG GCAGCGTCTT GGAGTTCGTG
CTCATGCACC AGACCGTCAT AGGACTAGAG GCGGTTAGGC AACTGCCGGA GGAGCCGGAC
GCCGCCGTGG CCTGCGTTGG CGGGGGGTCG AACTTCGCCG GCTTTACCTA CCCCATGATC
GGGATGAAGC TGAGGGGCGA GGGCTTCGAC AAGACGAGGT TCGTCGCAGT TGAGGCGGAA
GCCGCCCCCA AGCTCACAAA GGGGGAGTAC AAATACGACT TCCCAGACGC CGTGGGGATA
CTCCCCATGA TCAAGATGTA CACCTTAGGC CACGACTACG TCCCGCCGCC CGTCCACGCG
GCCGGCCTCC GGTACCACGG CGCCGCGCCG TCCCTCTCCT TGCTTCGGAA ATTGGGGATA
GTGGAGCCGC TCTCCTACCC CCAGGAGGAG GTCATGAAAG CCGCAGTGCT CTTCGCGAGG
ACGGAGGGCA TTGTACCGGC GCCGGAGTCG GCCCACGCGA TAAGGGCAGT GCTAGACCTC
GCAAAAAAGC TCCCGCGCGG CTCGGTAATA GCGTTCAACC TCTCCGGCCA CGGCCTCCTC
GACTCCGACG CCTACGAGAA GTTCCTGTAA
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| Protein sequence | MVDRWYNIAA DLPAVLAPPK DPDEGESRIG LLTRILPSAL IDQEFSAERW ITVPEEVRDA
YRRVGRPTPL LRAEGLERAL GTGVRIYYKY EGVLPVGSHK LNTALAQAYY AKADGAVEVA
TETGAGQWGM AVSLAAALFG LKAVVFMTRS SYNSKRQRLT FMRTYGATVY PSPSEVTEAG
RRHYRPDHPG SLGIAISEAV EYVLSGEKRH YLPGSVLEFV LMHQTVIGLE AVRQLPEEPD
AAVACVGGGS NFAGFTYPMI GMKLRGEGFD KTRFVAVEAE AAPKLTKGEY KYDFPDAVGI
LPMIKMYTLG HDYVPPPVHA AGLRYHGAAP SLSLLRKLGI VEPLSYPQEE VMKAAVLFAR
TEGIVPAPES AHAIRAVLDL AKKLPRGSVI AFNLSGHGLL DSDAYEKFL
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