| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1416 |
|---|
| Symbol | |
|---|
| ID | 5054460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1275970 |
|---|
| End bp | 1277088 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640468957 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001153626 |
|---|
| Protein GI | 145591624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.189691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA ACAAAATAAT ACTAATAGTA ACACTGGCGG CGGCACTGGC ATTTGCCCAG
ACCGTGACGG TCAGTGCCGG GGCGAACGCG ACTCTGAGCG ACCCGGCTAA GTTCCACCTC
TGGCTCAAGT GCAGGGCCGT GGAGCTCTAT ATCAACGCCA CGGACGTCGG GCTGAGGGGC
AACGTGACGT TGCCGCCGTG CGAAGAGCTG GTTCAGAACT TCACGTCTAA TAGACTAGTC
TTCATCATAG GGAGGGCCGG GGTTAGGCCG CTCCCCATGA TAGGAGTGGG GGAGCTAAAA
GCGCTCAACG CGTCCGACCC CCACGGAGTT TTCACACAAC TCAGGGAAAT TAGGAGACAA
GCCCTCCTCA ACCTCCCCAA GCAGATCAAC AAGACGGTTG ACACGGCGTA TAGAGAGATT
GAAACCGGAA ACGGAACGGA GCCGCTAGAA AGAGCAGTAC TAACACTAAC CAGAGTTAGA
AGCTTACTAG AGAAAGTAAA CGCTTCCCAG CGCGCGGTTG ATGTACTGAG CAGAAATATA
GAATTTCTAA ACGACACGCG CCAGTTCATC GCCGAGGCGA GGACGGCGCC TTACGACAAA
CTAGCAGCGC TGTTGGAGAG AATTCAGAAC CACACGGACC TGCCTCATGC CAAGAAGGTT
ATGGAGAGGT ACATGGTCCA GACTAGGGCT ACCATAGAGG AGAGAGCGTG GAAGGAACTT
GAGGAGATCT ACTCAAATCT CAACGCGACT TCCGAGACGG AGATGCTCGC CGTGCTCAAT
AAATCCGTGG CAACGCTTGA GAAAGTGACG AAACTGCTTG AGAGGGTAAA TGCATCTAAA
ACTGCAGTGG AGGCGGTGAG GAGAAACATA TTGTTGTTCA ACGAGACGAA GCAGGCGGTG
GAGTCTTTGC TCAGAGGCGA CTACGAAAAA GCCAAGGCCC AGTTTGAAAA ATTAAGGCAA
ATTCTCGGCC AGCTCCCCGA GTGGGCTAAA AAAGCGCTGG AGGAAAAGAT AAACAAAATC
AGTAAAGCGG TGCAAGAACG CGGAAGCGGC ACCCCAGCGC CGCCCATAGG CAATTCCCGT
CCGCAAAGGG GCAACGAGGG GAAGGCGCCG GGCAAATAG
|
|---|
| Protein sequence | MNTNKIILIV TLAAALAFAQ TVTVSAGANA TLSDPAKFHL WLKCRAVELY INATDVGLRG
NVTLPPCEEL VQNFTSNRLV FIIGRAGVRP LPMIGVGELK ALNASDPHGV FTQLREIRRQ
ALLNLPKQIN KTVDTAYREI ETGNGTEPLE RAVLTLTRVR SLLEKVNASQ RAVDVLSRNI
EFLNDTRQFI AEARTAPYDK LAALLERIQN HTDLPHAKKV MERYMVQTRA TIEERAWKEL
EEIYSNLNAT SETEMLAVLN KSVATLEKVT KLLERVNASK TAVEAVRRNI LLFNETKQAV
ESLLRGDYEK AKAQFEKLRQ ILGQLPEWAK KALEEKINKI SKAVQERGSG TPAPPIGNSR
PQRGNEGKAP GK
|
|---|
| |