Gene Pars_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1385 
Symbol 
ID5055200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1247857 
End bp1249416 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content58% 
IMG OID640468930 
ProductATPase 
Protein accessionYP_001153599 
Protein GI145591597 
COG category[R] General function prediction only 
COG ID[COG1855] ATPase (PilT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.111858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGAT ACATTGCCGA CAGCTCTGCT GTGCTCGACG GGACGTTGAA GGAGGTCGTC 
GTCAGCGGAA GAGTCAGGGG AACCCTCTTC CTCCTCTCGG AAATGGTGGA GTATTTCACA
TCACTGGCCA GGCAGGGCGA CGGTATCGGC ATTGTGGGGG TGGAAGAGCT TAAAGACCTG
TACGAGGTGG TGGATAAGCT CGGCCTCTCC GACTTCGTCA AGATAGAAAC GGTGAGCCTC
AACAGGAAGG TCGACCCCGA GGAGCTCAAC ATCTATGCCC GGCGCTTCGC CAAGGAGAAC
GGCTGTATCT ACATCACCAG CGACGAGGTG GCGAGAGACG CGGCGAGGTT GCAAGGCGTA
GAGGTACTCT ACCTGGGGAA GACGAGGGAG GTCCTCACGT TGGAGAGGTT TTTCGGGCCG
GAGGTGATGT CCGTCCACTT GAAGGAGGGC CTCCCGCCGC TAGGGAAGGT TGGGCGTCCC
GGCAACTGGC GGATAGTCCA GCTGTCCAGC GAACCGCTGA GCCGTAAGCA GTTGGAGATA
GTTGTAAGGG AGCTGATAGC TGAAGCCTCG AAGCTTAGTC CACGCACCAA GATCGAGATT
AGGAGGCCCC ACTCCCTTAT CATACAACAC AAGGAATACC GCGTGGTTGT TGTGTTCCCG
CCTGTGTCGG AGAGGCTTGA GATCACCGCA ACGAAGCCTG TGGTGAGAAA GAAGATAGAG
GACTATGGGT TGCCCCCCAA GGTCCTCGAG CGGCTTGAGA AAAGCGCCGA GGGCATACTG
GTTGCCGGCG CCCCAGGTGC TGGGAAGACC ACCTTTGCCC AGGCCCTGGC CGAGTTCTAC
CTAAGCAAGG GCAAAATCGT CAAGACTATT GAATCGCCCC GGGACATGGT GTTGCCGCCT
GCCATTACGC AGATATCGAA GAACTTAGCC ACATCTGAGG AGATCCACGA CCTCCTCCTC
TTGTCTCGCC CAGACTACAC AATCTTCGAC GAGATGAGGG ACACGGCTGA CTTCCAGCTG
TACGTGGACT TGAGGCTGGC GGGGGTCGGC ATGGTGGGCA TCGTCCACGC CACCTCGCCC
ATTGACGCGA TACAGCGGTT TATAAGGAGG GTGGAGCTGG GCATGATACC CTCCATAATC
GACACGGTCA TCTTCATGAA GGACGGGGAG GTGAGGAAGG TCTACGCCCT GTCCATGGTC
GTGAAGGTGC CGGCGGGGAT GCGGGAGGAG GACTTGGCGA GGCCGGTGAT ATTGGTGAAG
GACTTCATCA CAGACGAGGT GGAGTACGAG ATATACGTCT TCGGCGAGGA GACCTTCGTG
GTCCCAGTCA AGAGGGGAGA GGCAGTCGCC ATGGGTCCCA GCAGAAAGGT CTACTCCATG
GTGGTGTCTG CCCTTAAGCG GTACGTGCCG CCTCACGAGA TCAAACTAGA GGAGCGCGAC
GGCGTTATAG TAGTCAAGGT GCCTGAGGAG TACCTTGGCG TAGTCCTCTC GCGGGGCGTC
ACCAAGCTGG AGAAAATCAG GCGGAAGCTC TCAGTGGATT TCAGAATAGA GCCTAGGTGA
 
Protein sequence
MDRYIADSSA VLDGTLKEVV VSGRVRGTLF LLSEMVEYFT SLARQGDGIG IVGVEELKDL 
YEVVDKLGLS DFVKIETVSL NRKVDPEELN IYARRFAKEN GCIYITSDEV ARDAARLQGV
EVLYLGKTRE VLTLERFFGP EVMSVHLKEG LPPLGKVGRP GNWRIVQLSS EPLSRKQLEI
VVRELIAEAS KLSPRTKIEI RRPHSLIIQH KEYRVVVVFP PVSERLEITA TKPVVRKKIE
DYGLPPKVLE RLEKSAEGIL VAGAPGAGKT TFAQALAEFY LSKGKIVKTI ESPRDMVLPP
AITQISKNLA TSEEIHDLLL LSRPDYTIFD EMRDTADFQL YVDLRLAGVG MVGIVHATSP
IDAIQRFIRR VELGMIPSII DTVIFMKDGE VRKVYALSMV VKVPAGMREE DLARPVILVK
DFITDEVEYE IYVFGEETFV VPVKRGEAVA MGPSRKVYSM VVSALKRYVP PHEIKLEERD
GVIVVKVPEE YLGVVLSRGV TKLEKIRRKL SVDFRIEPR