| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1363 |
|---|
| Symbol | rpl34e |
|---|
| ID | 5054134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1227547 |
|---|
| End bp | 1227843 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640468909 |
|---|
| Product | 50S ribosomal protein L34e |
|---|
| Protein accession | YP_001153578 |
|---|
| Protein GI | 145591576 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2174] Ribosomal protein L34E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.603517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0122025 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCAA TGTTTTTATA TTGGTTTTTA GAGGGAGCCA TGCCTCGGCC GGCGTACCGC
TCTAGAAGTC TGAGGAGGGT AATGGTCAAA ACGCCGGGGA GCCGTACTGT AATTCACTAC
GAGAAGCGGG CATTGGGCGC GCCGCGGTGT CCCATAACTG GCCTTGTGAT TGGAGGCATG
AACGGGAAGA TCTACCGCAC AGGTGTGAAG ATTAGGGCGC CTAGCAGGCC ATACGGCGGT
GTTTATTCTC ACAAGGTAAT AGCACGCGCC ATCCGGCTCG CGGTGCGGGG CCAGTAG
|
|---|
| Protein sequence | MASMFLYWFL EGAMPRPAYR SRSLRRVMVK TPGSRTVIHY EKRALGAPRC PITGLVIGGM
NGKIYRTGVK IRAPSRPYGG VYSHKVIARA IRLAVRGQ
|
|---|
| |