| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1359 |
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| Symbol | |
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| ID | 5054064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1221280 |
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| End bp | 1223088 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640468905 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001153574 |
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| Protein GI | 145591572 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.013738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACTAA TCGTGGCGGA GAAGCGCTCG GTGGCGCATG CCATTGCAAA GTTCCTCGGC
GGGCGGTACA AACTGGAGAA GATACAAGGC GTGGCGGCCT ACCGCTTTAA CTACGGCGGA
AGAGAAGCCG TTGCGCTGGG GCTAAGCGGC CACCTTATGG ACTTCGACTT CACGGCTAGG
CAGAACGTGT GGACGTGGAT ACCGCCAGAG GAGCTCTTCG CATCGCAACC CCTCATAGTT
TACAGACCGG AGACTATGAA ATATATCAGG GCCCTTAGAA CCCTCGCCGC AAGGGCGCAC
GAGGTTTACC TTGCACTGGA CGCCGACGTG GAGGGCGAGG CCATAGCCTA CGAGGCGGCT
CTCTTGGTGC GACTTGTGAA CCCCCGCGCC AAGATTTACC GCGTCCGCTT CAACGCCGTG
ACTCAGAGGG AGATAACAAA CGCCTTCAGA AACCCCACCC ACATCAACTT GAGGATGGTG
GAGAAGGTAT TCACCAGGAT GCAAGTTGAC CTCACCCTAG GTGCCGTCTT CACCCGGTTC
ATAACACTCG CCGTGAGACA CTCGCTTGAT AGGGGACAGT TCCTCAGCTA CGGGCCGTGT
CAAACGCCCG TCCTGGGCAT CGTGGTCACC CGCGAATTAC AGAGGAGGAA TTTCAAGCCG
GAAAAGTACT ACGTCGTGAA GGCCCTAGTG GAGATAGGCG GCCACAGAAT AGAGATGTCT
GCTGACGTGA GGTTTAAGAC TAGAAAGGAG GCAGAGGAGG CGGCGGCAAC TATTAACCGC
GGCGTTGTAA AAGCCGCCGT GTACAGGCCA CACCACGTCA ATCCGCCAGT GCCGCTCGAG
ACTGTGGAGC TGGAGAGGAG GGCAAGCCGG TGGCTTGGGA TAAACTCGAA GCGGACCCTG
GACATAGCAG AGGAGCTCTA CAGAGCAGGC TACATATCTT ACCCCCGCAC AGAGACCACC
ATATACCCAC CGACGCTGGA TCTCAGAGAA GTACTACAAG AACTAGCCAG CGGCCACCTT
GGCTCCTACG CCGACGAGCT GATGAGGCGC GGTTTCAGGC CCACTCGCGG GGATTCAGAC
GACAGAGCAC ACCCGCCTAT ATACCCCACC AGAGCCGCTA CTAAAGGCGA AGTCGCAAAG
GCCTTCGGCA AACTCGCCCC CCAAGCATGG GCTATCTACG ACTTCGTGGT GCGGCACTTC
CTAGCCACCC TCAGCCCACC GGCGGTGGTA GAAAAACAGA AAATCATAGT CTCTTTCGGC
AAACTCGAAA TGGAGGCAGA GGGACAGCTG GTCGTCGACG AGGGCTACTG GCGCATTTAC
CCATGGGAGA GGCAGAGCAG TAAGCCCCTG CCTCGCGTAA GCCCCGGAGA CCCAGCAAGG
GCGGTGAAGG TAGATGTGGT AGAGCGGGAG ACCGAGCCGC CGCCCCAGAT GACCGAGTCG
GAGCTACTGG CACTGATGAA GAAGTACGGC ATAGGCACCG ACGCCACTAT GCAGGACCAC
ATACACACGA ACGTCAGGAG GGGCTACATG AAAATCACAA AAGGGAAGTG CATCCCCACT
GACCTCGGCA TAGCGCTAGC CACGTCGCTC TTCCAGTTCG CCCCCCAACT CATAGAGCCA
ACTGTAAGGG CTAAAATAGA GAAAGCGCTT AACTCCATAG TCACAGACGG CACCCCCCCA
GCCAGGCTCA TCTACGAAAT AAAAAAAGAA TTCGAAGAGT ACTACAAAGC GCTCAAGGCT
AGGAAAGAGG AGATAAAGAA GGCGCTTGAA ACGGCTTTAA ACTCATCTCG GAACAGCCAA
CGTGGATAG
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| Protein sequence | MILIVAEKRS VAHAIAKFLG GRYKLEKIQG VAAYRFNYGG REAVALGLSG HLMDFDFTAR
QNVWTWIPPE ELFASQPLIV YRPETMKYIR ALRTLAARAH EVYLALDADV EGEAIAYEAA
LLVRLVNPRA KIYRVRFNAV TQREITNAFR NPTHINLRMV EKVFTRMQVD LTLGAVFTRF
ITLAVRHSLD RGQFLSYGPC QTPVLGIVVT RELQRRNFKP EKYYVVKALV EIGGHRIEMS
ADVRFKTRKE AEEAAATINR GVVKAAVYRP HHVNPPVPLE TVELERRASR WLGINSKRTL
DIAEELYRAG YISYPRTETT IYPPTLDLRE VLQELASGHL GSYADELMRR GFRPTRGDSD
DRAHPPIYPT RAATKGEVAK AFGKLAPQAW AIYDFVVRHF LATLSPPAVV EKQKIIVSFG
KLEMEAEGQL VVDEGYWRIY PWERQSSKPL PRVSPGDPAR AVKVDVVERE TEPPPQMTES
ELLALMKKYG IGTDATMQDH IHTNVRRGYM KITKGKCIPT DLGIALATSL FQFAPQLIEP
TVRAKIEKAL NSIVTDGTPP ARLIYEIKKE FEEYYKALKA RKEEIKKALE TALNSSRNSQ
RG
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