Gene Pars_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1354 
Symbol 
ID5054147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1216281 
End bp1216694 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content50% 
IMG OID640468900 
Producthypothetical protein 
Protein accessionYP_001153569 
Protein GI145591567 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0640158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCGGG GTCTTGGCTG GTTTGAAGTA AAGTTTAGGT GTATAAAGTG TGGGATTTGT 
TGTATAGGGA CTGAGATGGA ACTCCTCGCC GAGGATATAA GGCGCATAGA GGCGGCGGGG
TTTAAGCTTG ATGAATTCGC CGTGGAAAAA GACGGCGTGT ACCGGTTAAG GAATGTGGAC
GGCCACTGCG TCTTTTACGA CCCTGAAAGC CGTAGTTGCA AAATTTACGA CATTAGGCCA
GTGGGGTGCC GTCTATACCC ACTAGTGTAC AACGGCGAGA GGGTAGAAGT GGATAAAACT
TGCCCCACTT GGGACACCGT GCCTCATAGT GAGGTAGAAA GGTTGGGGCC TTACGTGGTA
AAGTTCTTGG AAGAGGTGAA GCTGGCGAAG ATAAAGATCA AGCTAAGGCT TTGA
 
Protein sequence
MWRGLGWFEV KFRCIKCGIC CIGTEMELLA EDIRRIEAAG FKLDEFAVEK DGVYRLRNVD 
GHCVFYDPES RSCKIYDIRP VGCRLYPLVY NGERVEVDKT CPTWDTVPHS EVERLGPYVV
KFLEEVKLAK IKIKLRL