Gene Pars_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1350 
Symbol 
ID5054830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1213544 
End bp1214182 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID640468896 
Productcreatininase 
Protein accessionYP_001153565 
Protein GI145591563 
COG category[R] General function prediction only 
COG ID[COG1402] Uncharacterized protein, putative amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.892461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.094205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCAAA GACTATGCAT TTTACCCGTG GGGTCGTACG AACAACATGG CCCACATATG 
CCTCCCACTG TAGACGCTGA AGTGGCGCAG TTTGTGGCAA GAGAGGTGGT CAAAAAGGTC
GGAGGGAGCG AACTCCCACC AATCTACTAC ACATGTAGCG AGGAGCATAG GGACTTTCCG
CAGACCATCT CGGTAAGGTG TAAGTCCTTC ATCCCCTATT TGGAAGAACT GCTCAGATCT
GCGGCGGAGA AATGTGGCAT AGTGGTAGTA GTTGTAGGAC ATGGCGGCGT GTGGGAAGCG
GTGAAGCTTG TGGCGGATCA ATTAAACTAC GAACTAGGCC CCCGCTTCAT CGCTGTAAAT
ATATGGTCTG TGGTCAAGGC GAAGGACCAC GCGGGGACGG ATGAGACCAG CATATACCTG
GCGGCGGGAG GCTCGCTGAC AGGGAAGCTC ATCGAGGTGT GCGAAGGCGA CGTCTCCCTA
TTCGGGAACA CCAGGGTCTC GTCGTTTTCA AAAACCGGCG TGGTCGGTTG CCTGAAGCCG
AGCGAGGTGT CGGCCGAGCG GGGCAGGGAG ATGTTGGAAA AAATTGTTAA TTTCATTGTT
AAAAAAATTG AGGAGTTTAC TGCTCTCCGC ACTTATTGA
 
Protein sequence
MLQRLCILPV GSYEQHGPHM PPTVDAEVAQ FVAREVVKKV GGSELPPIYY TCSEEHRDFP 
QTISVRCKSF IPYLEELLRS AAEKCGIVVV VVGHGGVWEA VKLVADQLNY ELGPRFIAVN
IWSVVKAKDH AGTDETSIYL AAGGSLTGKL IEVCEGDVSL FGNTRVSSFS KTGVVGCLKP
SEVSAERGRE MLEKIVNFIV KKIEEFTALR TY