Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1344 |
Symbol | |
ID | 5055662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1208760 |
End bp | 1209572 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640468890 |
Product | 6-phosphogluconate dehydrogenase, NAD-binding |
Protein accession | YP_001153559 |
Protein GI | 145591557 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.915457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.167871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATAA CCGTTGTTGG GATGGGCAAC ATGGGCACTG CCTTTGCCAA GAGAGCTGCG TCTCAAGGCT TTAAGGTGTA TTGGTGGAAC CGCACTAGGG AAAAGGTAAG GGACGCGCCG GGCGCGCCCA TAGCCAAACT ATCGGATGCA AGAGGCCTAG TTGTGGTATT CGTCGCAGAC GACGATGCCT TATTCGCCGT GGCGCCGGAG CTCGGCGGCG ACTACATAGC CCTGGCGGGG ACGTACTCAA TAGACGCAGT GAAGAGGGCT ATTGACACGC TGTCGGCGAG AGGCAAAAAA GCCTTTGCAA TGCCCGTCGT GGGGAGCCCG AGGAACGTGG AAGGAGGAGA CGCAATATAC ATAATAGGTG CCTCCGAGGA CGTCTACGAA AAGTTGCGGG AGGCCTTGAA AAAGTTCGGC GTTCTCTTCT ACGTTGGGGA CAACGCAAAG GCCGCGGCGC TCAAGCTGGC GTACAACTCC TTCTTGATCT CGACAGTAGC TGTGCTGGGG GAGGCGCTGA CGCTTGCGCG TAGGTACGGA ATTGACCACG ACGTTTTCAA AAAACTGCTC GAGCAAACGG TGTTCAAAGA AGTAGCTACG CGCTACGTGG ACAGAATTGT AGGGGCAACC GCACCTACGT TCACAGTTAA AAACGCCGCC AAGGATATGA GGTACGCCTC ATTAGCTGCG GGAAAGGCAG AGGCTGGAAA CGTGGCCATA AGCGGCGTCA AGGCCCTGTA TGAAATACTA ACAGCCATGG GACTAGGAGA GGAGGACTAC GCCAAAGCGG GGGTTTTAGA GACGAGGAAA TGA
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Protein sequence | MEITVVGMGN MGTAFAKRAA SQGFKVYWWN RTREKVRDAP GAPIAKLSDA RGLVVVFVAD DDALFAVAPE LGGDYIALAG TYSIDAVKRA IDTLSARGKK AFAMPVVGSP RNVEGGDAIY IIGASEDVYE KLREALKKFG VLFYVGDNAK AAALKLAYNS FLISTVAVLG EALTLARRYG IDHDVFKKLL EQTVFKEVAT RYVDRIVGAT APTFTVKNAA KDMRYASLAA GKAEAGNVAI SGVKALYEIL TAMGLGEEDY AKAGVLETRK
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