Gene Pars_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1344 
Symbol 
ID5055662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1208760 
End bp1209572 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID640468890 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_001153559 
Protein GI145591557 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.915457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.167871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAA CCGTTGTTGG GATGGGCAAC ATGGGCACTG CCTTTGCCAA GAGAGCTGCG 
TCTCAAGGCT TTAAGGTGTA TTGGTGGAAC CGCACTAGGG AAAAGGTAAG GGACGCGCCG
GGCGCGCCCA TAGCCAAACT ATCGGATGCA AGAGGCCTAG TTGTGGTATT CGTCGCAGAC
GACGATGCCT TATTCGCCGT GGCGCCGGAG CTCGGCGGCG ACTACATAGC CCTGGCGGGG
ACGTACTCAA TAGACGCAGT GAAGAGGGCT ATTGACACGC TGTCGGCGAG AGGCAAAAAA
GCCTTTGCAA TGCCCGTCGT GGGGAGCCCG AGGAACGTGG AAGGAGGAGA CGCAATATAC
ATAATAGGTG CCTCCGAGGA CGTCTACGAA AAGTTGCGGG AGGCCTTGAA AAAGTTCGGC
GTTCTCTTCT ACGTTGGGGA CAACGCAAAG GCCGCGGCGC TCAAGCTGGC GTACAACTCC
TTCTTGATCT CGACAGTAGC TGTGCTGGGG GAGGCGCTGA CGCTTGCGCG TAGGTACGGA
ATTGACCACG ACGTTTTCAA AAAACTGCTC GAGCAAACGG TGTTCAAAGA AGTAGCTACG
CGCTACGTGG ACAGAATTGT AGGGGCAACC GCACCTACGT TCACAGTTAA AAACGCCGCC
AAGGATATGA GGTACGCCTC ATTAGCTGCG GGAAAGGCAG AGGCTGGAAA CGTGGCCATA
AGCGGCGTCA AGGCCCTGTA TGAAATACTA ACAGCCATGG GACTAGGAGA GGAGGACTAC
GCCAAAGCGG GGGTTTTAGA GACGAGGAAA TGA
 
Protein sequence
MEITVVGMGN MGTAFAKRAA SQGFKVYWWN RTREKVRDAP GAPIAKLSDA RGLVVVFVAD 
DDALFAVAPE LGGDYIALAG TYSIDAVKRA IDTLSARGKK AFAMPVVGSP RNVEGGDAIY
IIGASEDVYE KLREALKKFG VLFYVGDNAK AAALKLAYNS FLISTVAVLG EALTLARRYG
IDHDVFKKLL EQTVFKEVAT RYVDRIVGAT APTFTVKNAA KDMRYASLAA GKAEAGNVAI
SGVKALYEIL TAMGLGEEDY AKAGVLETRK