Gene Pars_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1341 
Symbol 
ID5055516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1206458 
End bp1207081 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID640468887 
Producthypothetical protein 
Protein accessionYP_001153556 
Protein GI145591554 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.288027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.229605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAA GGCCGGAAGG AGGCTCGGGG CGCCCTAAGG CGCTGATCAC GGGGACGCCG 
GGCGTGGGAA AAACTACACA ATGTAGAAAA CTTGCGGCGT ACCTCGGCGT CAAGTGCGTC
ACTGCCGGAG AGGCGCTTCG CGGAACGCCA TTCGTGAGGT ACATACCAGA GCTCGACACT
TACGAAATTG TCGACATGGA GAAGGCAAAG GAGGTGGTGC ACCTCGCTGT AGGGACAGGG
GACGTAGTTG ATACGCACAT AATAGAGCTG TCTCCAGATC CTGACGTCAT CGTGGTGTTG
CGGAAGGCGC CAGACGTGTT GTATAAAGAG CTGAAAGACA GGAAGTGGCC AACGAAAAAA
ATACTTGACA ATGTGTGGGC CGAAATTCTA GACGTCGTAT ACGTCGAGGC TTCCTCTAGA
TGGCCCTGGG CTGTACAAAT CGACGTCACG CACCGGACGC CTGACGAGAC GTTTGAAATA
ATTAGGCGAT GCGTGGCAGA GGCTAAGTGT GTCGGAGATG AGGTTGATTG GCTCGACTAC
GCGGAGAGGT CAGGTTTCCT ATCTTTTATC GAACGTCTGT CTCGCTTGGG AGGTTTTTCT
TCACAACCTT CTTCTCTATC ATGA
 
Protein sequence
MWQRPEGGSG RPKALITGTP GVGKTTQCRK LAAYLGVKCV TAGEALRGTP FVRYIPELDT 
YEIVDMEKAK EVVHLAVGTG DVVDTHIIEL SPDPDVIVVL RKAPDVLYKE LKDRKWPTKK
ILDNVWAEIL DVVYVEASSR WPWAVQIDVT HRTPDETFEI IRRCVAEAKC VGDEVDWLDY
AERSGFLSFI ERLSRLGGFS SQPSSLS