Gene Pars_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1331 
Symbol 
ID5054104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1200268 
End bp1200789 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content50% 
IMG OID640468877 
Producthypothetical protein 
Protein accessionYP_001153546 
Protein GI145591544 
COG category[S] Function unknown 
COG ID[COG1547] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.323976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.80909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTACT TGCTTATCGT AGAAAACCCA GGCTACACTC CAGGCCACCG CGAGGAGTTG 
CTAAGAAGGA TAAGAGCAGC GCTCCCAGTC ATCTCATTGA GGGTGGCGTC GACACATGTA
GAGGTTGACG TTAAGTCAGA CGACTTGGCC AAGGCTAAAG AGACAGTGGA AAGGGTAATA
GGCGGGAAGG TGTTGGAGGC GGTGGATATA ACTTTTGAAG ATGTGCCTGG AGGAGTCGAG
ACCTACGTAA GGCTTTTCAA CGCCGAGAGG TTCTGGGAGG CGCACAACGC CTTGGAGGGG
CTCTGGCGGC GGACCAAATC CCCAACTCTC CAAGGGCTTA TAATGCTGGC CGCTGCCTTT
GTCAAACTGC AAGAGGGCTC GCCGGAGAAG TTCGAGCGTT TGTTAAAAGA GGCGATATAC
CTAATAGAGG AGGACGTCGG TTGCATAAAA ATAAAAGAAG TAAAAAAGCT TGCAGAGAAG
GCGTTGTTGG AAAAGAGGCC GTTTAAAATA ACATGCCTTT AA
 
Protein sequence
MRYLLIVENP GYTPGHREEL LRRIRAALPV ISLRVASTHV EVDVKSDDLA KAKETVERVI 
GGKVLEAVDI TFEDVPGGVE TYVRLFNAER FWEAHNALEG LWRRTKSPTL QGLIMLAAAF
VKLQEGSPEK FERLLKEAIY LIEEDVGCIK IKEVKKLAEK ALLEKRPFKI TCL