| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1315 |
|---|
| Symbol | |
|---|
| ID | 5055924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1186556 |
|---|
| End bp | 1187806 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640468861 |
|---|
| Product | RNA modification protein |
|---|
| Protein accession | YP_001153530 |
|---|
| Protein GI | 145591528 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.107305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGGG CCTATATAGA GACTTATGGT TGTTGGCTGG CTAAGGCCGA TGCGGAGATC
ATCAGACAGA GACTGGGGCT TGTGGCTGTG GAAAGGCCCG AGGATGCCGA CGTGGTGATG
ATCTATACAT GCGCGGTGAG GGAAGACGGC GAGGTTCGCC AGCTTGCAAG AATAAGGGAG
CTTGCGGGTC TACGCAAGGA GGTTGTGGTG GCGGGTTGTC TCGCCAAGCT GAGGCCGTAT
ACGATTAAAT CCGCAGCGCC TAACGCGCGT CTGTTATACC CCTCTGAGGT GGAGGGTGGG
CAGAAGAGGG AGATGAAGGT ACTGCCCAGG TACGAGGGCG GCGTCATTTA CACGGTGCCT
CTACAGGTCG GTTGCCTCGG CAACTGCACC TTCTGCGCTA CTAAGTACAC GCGGGGTGGC
GCCGGCTACG TCAAGAGTGC CAATCCCGAC GACGTGGTGC GCCACGTGAA GGAGGCCGTG
GCGAGGGGGG CGAAGGAGAT CTACCTGACA GGTCAAGACG TCATTACCTA CGGTTTCGAC
ATGAGGTGGA GGCCCGGCTG GAGCCTGCCG GATCTCCTGG AGCGGATATT GAGGGAGGTG
GAGGGGGAGT ACAGGGTTAG GATAGGCATG TCGGAGCCTT GGGTATTTGC GAGGTTTGCA
GATCGTCTCC TCGACATTGT TAAGGGCGAC CGCCGGGTGT ACCGATACTT CCACCTCCCG
GTGCAGTCCG GAAGCGATAG GGTGCTTAGA GCGATGGGGC GGAGATACAC CGTTGATGAG
TATAGGGAGC TTGTGAGGAA GATTAGGAAG ACGTTGGGAG AGTTCGCCTT TGTCGCCACC
GATATCATAG TCGGCTTCCC CGGCGAGGCT GAGGACGACT TCTGGGAGTC GGTGAAGCTG
GTGGAGGAGC TCCAGCTGGA CAAGGTGCAC GTGGCTAGGT TTAGCCCGAG GCCCTTCACA
GAGGCCGCTG TCATGCCTAG ACAAGTCCCC GACGCGGAGA AGAAGAGGAG GAGCAAAATC
CTGAGTGAGG TCTCTCTTAG AGTGGCCCGT CTGAGAAACG GCCTGCGTGT GGGGAGCCGT
GACGTCGTCT TAATCGACGA GGTTGACCAC GGGTTGGTTG TCGGCCGCGC AAGCGACTAC
AGACAGGTGG TGGTGAAAAG GGGCCACGGC GACGGCCTCA TTGGCCAGTA CAGAGAAGTC
CAGATAGTCG CCGCTGGCGC AGTCTACCTC TACGGCGACA TTGTAGAGTA G
|
|---|
| Protein sequence | MARAYIETYG CWLAKADAEI IRQRLGLVAV ERPEDADVVM IYTCAVREDG EVRQLARIRE
LAGLRKEVVV AGCLAKLRPY TIKSAAPNAR LLYPSEVEGG QKREMKVLPR YEGGVIYTVP
LQVGCLGNCT FCATKYTRGG AGYVKSANPD DVVRHVKEAV ARGAKEIYLT GQDVITYGFD
MRWRPGWSLP DLLERILREV EGEYRVRIGM SEPWVFARFA DRLLDIVKGD RRVYRYFHLP
VQSGSDRVLR AMGRRYTVDE YRELVRKIRK TLGEFAFVAT DIIVGFPGEA EDDFWESVKL
VEELQLDKVH VARFSPRPFT EAAVMPRQVP DAEKKRRSKI LSEVSLRVAR LRNGLRVGSR
DVVLIDEVDH GLVVGRASDY RQVVVKRGHG DGLIGQYREV QIVAAGAVYL YGDIVE
|
|---|
| |