| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1310 |
|---|
| Symbol | |
|---|
| ID | 5055801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1182822 |
|---|
| End bp | 1183409 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640468856 |
|---|
| Product | beta-lactamase fold-like Zn-dependent hydrolase |
|---|
| Protein accession | YP_001153525 |
|---|
| Protein GI | 145591523 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0262357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGGC TTCAGTTCAG AGGCGTCGAG ATCCGCAGGA CGGGCGGCGC CGCCGGCGTG
GCTATAAGAC ACGGAGGGGT TACCTTGTGT ATTGATGCGC TGGGCCTTGA CAGGTGCGAT
GTCCTTCTCT ACACTCACTC CCACCCGGAT CATTTCCCCC GGGGAGTTGC GGACTTTTAT
TCCCCCTTCG GAGGCCGTGT AGTGAGGCCA GGCGAGGTCC TAGACCTGGG GCCTTTCAGG
GTGGCCGTGA CTGACGCCTA CAACGTGACA AAGCTCCAAG GAGGGCGGCC TATCCACCCA
AGAGGCGAGG GCGTAGGCTA CGTCGTCGAC GCCGGCAGTG TGAGGCTGTA CCACACAGGC
GACACAGACC TCATAAAGGA GATGTCGTCT GTGGGTCCTG TGGACATCCT CTTTGTGCCC
ATAGGCGGAG GCTCGGTGAT GACTCCAGAG GAGGCCGCAG AGGCAGTAAT GCTTCTGAGG
CCTAAGATAA CCATACCCCT ACACTATGCC GAAAAGAGAC AATACGTCAA GTTCAGAGAC
ATAGCCTATC CCTACACTAA CATAGTCGCA CTGCCCAGCG GCATATAG
|
|---|
| Protein sequence | MLRLQFRGVE IRRTGGAAGV AIRHGGVTLC IDALGLDRCD VLLYTHSHPD HFPRGVADFY
SPFGGRVVRP GEVLDLGPFR VAVTDAYNVT KLQGGRPIHP RGEGVGYVVD AGSVRLYHTG
DTDLIKEMSS VGPVDILFVP IGGGSVMTPE EAAEAVMLLR PKITIPLHYA EKRQYVKFRD
IAYPYTNIVA LPSGI
|
|---|
| |