Gene Pars_1305 details

Gene Information

• Locus tag: Pars_1305
• ID: 5055682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum arsenaticum DSM 13514
• Kingdom: Archaea
• Replicon accession: NC_009376
• Strand: +
• Start bp: 1178267
• End bp: 1178656
• Gene Length: 390 bp
• Protein Length: 129 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640468851
• Product: CopG family transcriptional regulator
• Protein accession: YP_001153520
• Protein GI: 145591518
• COG category: [K] Transcription
• COG ID: [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
• TIGRFAM ID: [TIGR02793] nickel-responsive transcriptional regulator NikR

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.145448
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACGGA TTAGTCTGAC TCTTGACGAT AAGCTCTATA AAGAAATGGA AAATGCCATG 
TCTATTCTTG GCGAGACAAA CCGGTCCCGC TTCGTCGCCT CGATAATTGC GGAGAAGATC 
AGCGAGCTTG TACAAAAGCC TATGGCGTCT ATAATAGTCT ACATATATGA CCACGAAGTC 
GGCGAGGTGG CAAAGAACCT CACTGAGATT CAGCACGAGT TCAGAGACGT GATAAGGGCC 
TCGACACACA TACATCTAGA CGACAGGAAT TGCCTAGAGG TGATACACGC CCTCGGCGAT 
AGCGAAAGGA TAAGAGGCCT CGTCACGAGG ATGTCCAGAG TGGGCAGGGG TCTTAGGTTC 
TTAAGAGTGG TGAACATCCC ACGTCAATAA 

 

Protein sequence

MKRISLTLDD KLYKEMENAM SILGETNRSR FVASIIAEKI SELVQKPMAS IIVYIYDHEV 
GEVAKNLTEI QHEFRDVIRA STHIHLDDRN CLEVIHALGD SERIRGLVTR MSRVGRGLRF 
LRVVNIPRQ