| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1292 |
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| Symbol | |
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| ID | 5054476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1167838 |
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| End bp | 1168737 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640468838 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
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| Protein accession | YP_001153507 |
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| Protein GI | 145591505 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
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| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.46518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.800906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATG TGCACATACC AGACGGATAC CTAGATCCCT ACATGGCGGG CGCCACGTGG
CTGATTGCGG CCATCTACCT CTATTTTGCC GTGAGGAAAA CGCCTAGGGA TCTTCTACCT
AGAGTGTCGG CCGTAGCCGG CGCCATTTTC GTGGCCCAGA TGCTCAATTG GCCTATCCCA
GGCGGCACCT CGCTTCACTT CGTCGGCGGG GCCTTCGCGG CTATGTACTT AAACAGCCCA
TGGGCCGCCG GCATAGCCAT AGCGCTGGTC CTGGCAGTTC AAACACTTCT TTTTCACGAC
GGGGGCATAA CGGCGTACGG CGCTAACGTC TTGAACATGG GCGTAGTGTG CGTCTGGATC
GGATGGGCGC TGTGGAAGTT ATTAGAGAGG AGATACCCCC TTGCGGGGGC CTTCCTGGGA
GGATGGCTCG GCATATTCAT AGCGGGAACT GCCGCTGGTC TCGAGATCGG GTTAATGCCG
ACTATAGGCT ATCCGCTCTC GATCACGATC CCGGCAATGG CTATACCCCA CTTCCTCTTG
GGAATCGTCG AGGGGGCAAT AACCGTAGCC CTAGTGGCAA CTCTGCGGCG CTACGGCATG
ATGCCCGCGC AAATACCGGT CCTAGCCGAG GCCATGAGCA AGCGCTACCT AACACTCATC
TTGATCTTTC TATTGATCTC GCCGATATTC GGCGTTATTC TGGCCAACGC GGTCGGCTAT
GCTGAGCCCC TCGACAACGT AGCAGATATG TTGCACCTCA ACGAATCCGA GATAAACTGG
ACTCCGTTTA AGGACTACAC GGTGCCAGGC TTACCCGACG TTGTAGGCTA TATAATAGCC
GGCGCGATGG GCGTGGCCGT GTTCATACTG CTCACTTTGT TGTTCGAGAG AGGGAGATGA
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| Protein sequence | MTDVHIPDGY LDPYMAGATW LIAAIYLYFA VRKTPRDLLP RVSAVAGAIF VAQMLNWPIP
GGTSLHFVGG AFAAMYLNSP WAAGIAIALV LAVQTLLFHD GGITAYGANV LNMGVVCVWI
GWALWKLLER RYPLAGAFLG GWLGIFIAGT AAGLEIGLMP TIGYPLSITI PAMAIPHFLL
GIVEGAITVA LVATLRRYGM MPAQIPVLAE AMSKRYLTLI LIFLLISPIF GVILANAVGY
AEPLDNVADM LHLNESEINW TPFKDYTVPG LPDVVGYIIA GAMGVAVFIL LTLLFERGR
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