Gene Pars_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1285 
Symbol 
ID5055030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1163303 
End bp1164046 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID640468832 
ProductABC transporter related 
Protein accessionYP_001153501 
Protein GI145591499 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.562669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGG TGAGGGTGGA GGGGGTGGAG TTCTCCTACC CAGGCCGCCC CGTCCTCAAG 
GGAATTACCG TGGACATTCC GCCGAACGCC GTCACCGCCA TCTTGGGCCC AAACGGCTCC
GGCAAGACCA CCCTCCTCCG GGTAATAGCC GGCGTCTTGA GGGCCAAGAG GGGCGTGGTG
TACGTCGATG GGAGATCCAC GAGGGAGCTT GGCAAGGAAC TCTACAAGCA GCTAGGCTAC
GTCCCGCAGA GGATCTCTCC CACAGGCCGG CTGAGAGCTA TCGACTTGGT GGTCAGCTCT
AGGAAGCCTC ACATGATGCT CTACCCCTCG GCGCGGGATT ACGAGAAGGC CGAGGAGGCC
CTTAAGCTAG TGGGGGCTTC CCACCTAAGG GATAGATTCC TCGAAGAGCT AAGCGGCGGG
GAGCTTCAGC TGGTGTTAAT CGCGAGGGCT CTCGCCGTTG AGCCCAGGGT CCTCCTACTC
GACGAGCCTC TCAACAACCT CGACGTAAGG AACCAACTGC GGATAATGAG CATTCTTAAG
GATTTATCGA AGACGGCGAC CGTAATAGCC GTTCTACACG ACTTGAATAT CGCATATAAA
TACGCCGACT ACGCTATTTT CATGAAAGAC GGCGAAATAC ACGCCGCTGG CCCCGTCGAA
GAGACCTTCA GCGAGGATGT CCTGGAGGCG GTATACGGCG TAAGGCCCTT GATATTGAGG
GAACATAAAG GGGTATTGTT CTAG
 
Protein sequence
MVRVRVEGVE FSYPGRPVLK GITVDIPPNA VTAILGPNGS GKTTLLRVIA GVLRAKRGVV 
YVDGRSTREL GKELYKQLGY VPQRISPTGR LRAIDLVVSS RKPHMMLYPS ARDYEKAEEA
LKLVGASHLR DRFLEELSGG ELQLVLIARA LAVEPRVLLL DEPLNNLDVR NQLRIMSILK
DLSKTATVIA VLHDLNIAYK YADYAIFMKD GEIHAAGPVE ETFSEDVLEA VYGVRPLILR
EHKGVLF