Gene Pars_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1276 
Symbol 
ID5055980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1153129 
End bp1153863 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID640468820 
Producthypothetical protein 
Protein accessionYP_001153492 
Protein GI145591490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.160585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCTCT CCGCAGAGGA GAAGAGGCGG TTTTTGAAGG CGTTGGAGGA GGACCAAGAG 
TTTAGATACG CGGTGGCCGG CCTCCTCGGC CTCGGCGAGG TGTTGAACGA GCTGAGGAGG
CTGAGAGAAG ACTTCAATAA ATACGTCGAA AAAAGCGAGA GGAGGTGGAG GCAGAACGAA
AGGCGGTGGA AAGAAAACGA GAAGAGGTGG AAGGAGTGGT TTGACACGTG GAAGAAGTTC
TTAGAGGACT ACGAAAGGAG GTGGCAAGAA AACGAGCGTA GGTGGGAGGA GGAGCGGAAG
CGGTGGGAGA CTTGGTACGA GGCGTGGAAG GAGTTTTTAG AGGATTACAA GAGGCGCTGG
GAGGATGCTA ATAGGCGGTT TTCCCGCATA GAGGAGACGC TTGGCGCAGT GGCGGAGAGC
CAGTACACAC GATATGTTTG GGAGGACCTA AAGGAGGAGA TTAAGGCGAG GGGCGAGTTG
GTGATCCGCC GTGTGAGAAA CGCCAAGGTG GACAATGTCG ACGTGGATCT CCTCGTGGAG
ACTGATAGGC GGGTCTACGT GGTGGAGGTG AAGATCAGGC CGAAGATCGA CGACGTCGGC
GCCTTGCTAG CAAAGGCGGA GGTGGTGAAA GCCGCCTTGG GCAAAGAGGC GGTGCCGATA
CTGACGGGGA CTTGGATAGG AGACGACGTA GAGAAATACG CGAGGGGGAA AGGCGTGCTT
GTTTTCAGCT ATTAA
 
Protein sequence
MSLSAEEKRR FLKALEEDQE FRYAVAGLLG LGEVLNELRR LREDFNKYVE KSERRWRQNE 
RRWKENEKRW KEWFDTWKKF LEDYERRWQE NERRWEEERK RWETWYEAWK EFLEDYKRRW
EDANRRFSRI EETLGAVAES QYTRYVWEDL KEEIKARGEL VIRRVRNAKV DNVDVDLLVE
TDRRVYVVEV KIRPKIDDVG ALLAKAEVVK AALGKEAVPI LTGTWIGDDV EKYARGKGVL
VFSY