Gene Pars_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1272 
Symbol 
ID5055022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1146365 
End bp1146961 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content52% 
IMG OID640468816 
Producthypothetical protein 
Protein accessionYP_001153488 
Protein GI145591486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.658952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTGC CGGCGGGCGT TCATGAGGTG TACGTCGGTA CCTGGATCCC CGGCTTCGTC 
CACAAGGTGG TGGTCGTGGT GAACGGCGTG GCAGACGTGA CGCTTTTAGT TAGAGATTTT
TCAATATATG CGCGTATTGC CGCTGATACG CCTGTGGTGG TGCAGTTTGG CGTAATGTAC
TTCCCCCTGT TGCCTCTCGC AGTTTTTATA TACCTAGTCT TAATGAGGGA AGAGGTTGCT
AGGAAACTGG CGGCCCTCTG TGCGCCCCTC TACAGCAGGT TTACAAGGCC CCTCGACTTT
CTCAGCAACA AGCGCCGAAA AGCTATCTAC GAGTACATAC AACAAAGGGG TTACAGCTGG
CCACGCGAAA TAGAAAAGGT TTTTAACATG GCCTACGGCG AGGTTCAGTG GCACCTCGCC
CTACTTGAAC GCGGTGGTTT TATTTACAGC TTCCGGGCTC TCAGAAGAAG ATTCTACGTA
GACAAGTCCC TGGAGTTCAG AAATGCCCTC GAAAAGATAT ACCGAGAGCA AGCCCGGAGG
GCGCCGACAG AGGATGAAGT AGCACAAGCC GAAGACAGCC TATCAGCAAG ACGGTAG
 
Protein sequence
MYVPAGVHEV YVGTWIPGFV HKVVVVVNGV ADVTLLVRDF SIYARIAADT PVVVQFGVMY 
FPLLPLAVFI YLVLMREEVA RKLAALCAPL YSRFTRPLDF LSNKRRKAIY EYIQQRGYSW
PREIEKVFNM AYGEVQWHLA LLERGGFIYS FRALRRRFYV DKSLEFRNAL EKIYREQARR
APTEDEVAQA EDSLSARR