Gene Pars_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1242 
Symbol 
ID5054169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1123976 
End bp1124410 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content56% 
IMG OID640468787 
Producthypothetical protein 
Protein accessionYP_001153460 
Protein GI145591458 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TTGAAAAGAA GAACAAGCTG GCGATAATAG CGTGGTCGGG AACCGTAGAC 
AAGCTATACC CCGTGGCTAT TCTCTCCAGC GCCGCCGCGG CTGGGGGGTG GGAGGTGGAG
CTATTCTTCA CCTTCTGGGG CCTCAACGCC ATTAGGAAGG AGATGCTCAA CGCCCCGCCT
AAGATATCTG CTGACTTCTC GGAGTACGCG CCTGCGGTGG CACAGGCTGT AAAACAGATG
AACTTCCCGC CGTGGCACGA GCTCTTGAGG CAAGCCAAGT CCATGGGGAA TGTCAAGATC
TACGCCTGCT CCACCACGAT GGAGATGTTC GGCATAAAAG ACAAGTCGGC CCTAGCCGAC
TTCGTAGACG ACGTCGTCGG CGCAGCCACC TTTTTAGAAA GGGCGAAGGA CGCCGCGGTT
ACGCTCTTCA TATAG
 
Protein sequence
MEKVEKKNKL AIIAWSGTVD KLYPVAILSS AAAAGGWEVE LFFTFWGLNA IRKEMLNAPP 
KISADFSEYA PAVAQAVKQM NFPPWHELLR QAKSMGNVKI YACSTTMEMF GIKDKSALAD
FVDDVVGAAT FLERAKDAAV TLFI