Gene Pars_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1239 
Symbol 
ID5054713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1121140 
End bp1121676 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content59% 
IMG OID640468784 
Productankyrin 
Protein accessionYP_001153457 
Protein GI145591455 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACG CCGACATGGC GGAGCTTCTG GTTAAACGCG GCGCAGATCA GAACGCGAAG 
ATTAGGGAAG GCTTGATGCC TCTGCACGTA GCCGCCTCTC AGGGCCATGT CGACGTGGCA
GAGGCTTTGC TTATATACGG AGCGGATCCA AACGCGGAGA GTAAAGAGGG CTGGATGCCC
CTCGACGCGG CCAAGGGTGA GGTGCGCGGC GTGTTAGAGA AGTGGATGAG ACAGAGGCGG
CTGGAGAGGG GAAAAGATGA CACGCTTAAA GACCTGTTGA TCCAATATAA GTCGAGCTCC
CCAACTGCCA TCCGCCAAGT CGTTGCAAGG CTTAAAGTCG CCTGCAGACT TCACGCGGTA
TACGCAATTG CCCACATCCA CGGCGCCGAC GTTAATGAGA CGCGCCAATC CCGAGTAACG
GCTGTGATCG CGACTGCCGC CGACGAGGCG TGTCTAATAA GCTGCCGCCG CCACTCGGCT
GTTCTGACCA GGCCCCCAAA GATTGTCGAC GCGTTGCCAC CGACACGTTG CCCTTGA
 
Protein sequence
MGNADMAELL VKRGADQNAK IREGLMPLHV AASQGHVDVA EALLIYGADP NAESKEGWMP 
LDAAKGEVRG VLEKWMRQRR LERGKDDTLK DLLIQYKSSS PTAIRQVVAR LKVACRLHAV
YAIAHIHGAD VNETRQSRVT AVIATAADEA CLISCRRHSA VLTRPPKIVD ALPPTRCP