Gene Pars_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1235 
Symbol 
ID5055795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1116471 
End bp1118360 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content60% 
IMG OID640468781 
Productadenylylsulfate reductase subunit alpha 
Protein accessionYP_001153454 
Protein GI145591452 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR02061] adenosine phosphosulphate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGT TGCACTTCCC CACTAGGATC GTCGACACTG ACATACTCGT CATCGGCGGC 
GGGATGGCGG GGTGTGGCGC TGTTTTCGAA GCAAAGTATT GGTGCCGGGG CAAGTGCAAG
GTTACGCTGG TGGAGAAGGC AAACACCGAG AAGTCAGGTG CGGTGGGCAT GGGCCTCTCC
GCGTGCAACC TCGGCGTATT CACAACAGAT CCCGACGACC CCAAGCCCGA GGACTTCGTG
CAGTACGTCA GAAACGATCT GCTGGGCACC ATTAGGGAAG ACCTCGTCTA CGATATCGCC
AGGCACATGA CCTCGACTAT AAAGCTTTTC GATGAGTGGG GTCTCCCCAT ATGGCGCGAC
CCGAAGACGG GCAAATACCT CCGCACGGGG AGGTGGCAAC ACCCAATACA CGGCGAGTCC
TACAAGGCCA TAATTGCCGA GCCTTGCAGG AAATCTGCAG ACGAGGTGTA CGAGAGGGTG
TTCATAACGC ACCCGCTGCT CGACGAGGAG AGACCGAACA GAATCGCAGG GGCGGTGGGG
TTCGGCGTCC GGGACGGCAC CTTCTACGTC TTCAGGGCCA AGGCTGTAAT AGTGGCTGCG
GGAGGCACCT CGCTCTTATA CAGGCCGCGC TCCACCGGCG AGGGCCTAGG CCGTGCCTGG
TACCCCACCT GGGCCAACGG CAGCGCCTAC GCCATACCGC TACTCGCAGG CGCAGAGACC
GTCAACATGG AATTCCGCCT AGTGGTTGTT AGATTTAAAG ACGCCTACGG GCCGGTGGGC
TTCCCCTACC TGCTCCTCAA GATGAGGTCT ACCGACGTCT ACGGCAAACA GTGGGAGCCC
CTGCCGGACG AGGAGAAGGC CAAGCTGGCT AAGATCTTCT ACGACTACGC CTGGGCGAGG
CCGACGCCGA CGCCTATAAG GACGTGGGTG ACCATTCAGA ACCTCAAAGA GGGCCGCGGC
CCCGACTTGA TGCAGACCCA GGAGAGGCTA CCAGACGAGG AGTCGCTTAA GGTGCTCTTC
GAGGACTATC TCGACATGAC CCCCACCCAG GTCTTTCTCT GGGCATCGCA GAACATTCAC
CCGCAGAAAC AACCCAGCGA GCTGGTGCCG ACTGAGCCCT ACGTCCAGGC GAGCCACGGA
TCGTCTGGCG GGATGTGGGC CAGCGGTCCG CCTGACATAG CGCCTGAGGA GTATAGGTGG
GGCCCCAACA GGATGTTGAC AGTGGAGGGC ATGTTCGGCG CCGGGGACGT GGTGGGGGCC
TCGGGACACA AGTTCTCAAG CGGGTCGTTC ACAGAGGGCC GCATCGCGGG GAAGGCGGCG
GCGCGGTACG TTCTGGCCGG CCCAGGCAAG GACTACAAGC CGGCGATCAG CAACGACACA
ATAGAGAGGT ACAAGGAGAT CGTATACCGC CCGTTGGAGT GGTATCACAA GAACCGGCCC
CTCACAACGA CGCCGGAGAT GCCGCCTGGC TATACCAACT GGTTCGAGAT ACACCCCAAC
TACCTCAACT GGTACCAGCT TTTGACGCGT CTGCAGAAGA TTATGGACGA GTACGCCGCA
GGCTGGGGCA TGTTCTACAT CACGAACAAC TATCTGCTTA ACAGGGGCTG GGAGCTGTTA
AGAATGCTTG AGGAGGACTT CCGCTTCGCC GCGGCGGCCA GCCTCCACGA GCTTCTCCGG
GTATGGGAGA CCTACCACCG CCTCCTCGTG GGCCAGGCCG TGGTCTTCTC GATGATGAAC
CGCAAGGAGT CCAGAGGCTA CTACCTACAC GCCGACTACC CATACATAGA CGAGGAGAAC
TGGCACGTCT TCAGCCACGT GAGGCGCGAC CCTAAGACCG GCCAGTGGAG CTTCAGGACC
TCGCCGGTGA TACACATAAT CCCACCGTAA
 
Protein sequence
MSALHFPTRI VDTDILVIGG GMAGCGAVFE AKYWCRGKCK VTLVEKANTE KSGAVGMGLS 
ACNLGVFTTD PDDPKPEDFV QYVRNDLLGT IREDLVYDIA RHMTSTIKLF DEWGLPIWRD
PKTGKYLRTG RWQHPIHGES YKAIIAEPCR KSADEVYERV FITHPLLDEE RPNRIAGAVG
FGVRDGTFYV FRAKAVIVAA GGTSLLYRPR STGEGLGRAW YPTWANGSAY AIPLLAGAET
VNMEFRLVVV RFKDAYGPVG FPYLLLKMRS TDVYGKQWEP LPDEEKAKLA KIFYDYAWAR
PTPTPIRTWV TIQNLKEGRG PDLMQTQERL PDEESLKVLF EDYLDMTPTQ VFLWASQNIH
PQKQPSELVP TEPYVQASHG SSGGMWASGP PDIAPEEYRW GPNRMLTVEG MFGAGDVVGA
SGHKFSSGSF TEGRIAGKAA ARYVLAGPGK DYKPAISNDT IERYKEIVYR PLEWYHKNRP
LTTTPEMPPG YTNWFEIHPN YLNWYQLLTR LQKIMDEYAA GWGMFYITNN YLLNRGWELL
RMLEEDFRFA AAASLHELLR VWETYHRLLV GQAVVFSMMN RKESRGYYLH ADYPYIDEEN
WHVFSHVRRD PKTGQWSFRT SPVIHIIPP