Gene Pars_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1233 
Symbol 
ID5055320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1114984 
End bp1115850 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content52% 
IMG OID640468779 
Producthypothetical protein 
Protein accessionYP_001153452 
Protein GI145591450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.80526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGTAG AATCGCCAGT AGACTGGTTT GCAATTGACG TCTTGGCCAT CGCCACAGTT 
ATGTGGATAC TTGCTACGCT CTGGTACAAA GGGGTTAGGC ATGCCAACTT AATGCGCTAT
CCCCAAATCC AGATGTTGAT CCCCTACTCC CAGTGGGAGA GCAAGCTTCT ACAGGAGAAG
CCCCAGATAG GAGCTGGCAA AGCCATCTCC GCCTTTTTCA AGACATTGTT CGTAGATGTG
TTAGCCATGA ACATCCTCAA GTGCGAATTC GGCCTATCTG AGAAAGAGGT GGTGAAGACG
AGGACGGCGA AGAGGACGGC CAAGCTGTTG ATGGTGTGGG GATTTGTATT CGCCGGGATA
TCCACCACTC TGGCCTACTT GATGTTCCCC CACAACATGA TAGTAATAGA CCTCACACAC
CCAGCTAGGA TATTTGGCAT GCTGGGAGGC GTGTTTATGA TAGTCGGCGC CCTCGTATGG
TTTTCGGCGA GGTATAAGGA AGCCAAGTAC GCGGGGCCCT TCACGCCTGC AAAGTTTGAC
TGGATCGGGG CAGACTACCT CCCGCTGATG GTGTTGTTGC TGGGGGTGTC AGGCTTTGTT
CTCCAGGGGG CTATACTAGC CTACGCCTCC ATGGGTGGAG CCGCCGAGCC GTTTCTCTAT
TTCGCCGTCC ACTTCCACGC CATTCCCGTC GCGGCGTTTT TCTGGCTCTT CTTCTGGACA
AAGGCTGACC ATATCATTTA CCGCATCTTC TGGCGCATAT ACGAGTACGC AGATAAGGAC
TTTGCAGGAA CTAACACAAG ACTCCCACCA CCCACCATAA AGTATCTAAA TAAGACGGGC
AAGGAGATCA AAGGCGGCTA CGCATAG
 
Protein sequence
MCVESPVDWF AIDVLAIATV MWILATLWYK GVRHANLMRY PQIQMLIPYS QWESKLLQEK 
PQIGAGKAIS AFFKTLFVDV LAMNILKCEF GLSEKEVVKT RTAKRTAKLL MVWGFVFAGI
STTLAYLMFP HNMIVIDLTH PARIFGMLGG VFMIVGALVW FSARYKEAKY AGPFTPAKFD
WIGADYLPLM VLLLGVSGFV LQGAILAYAS MGGAAEPFLY FAVHFHAIPV AAFFWLFFWT
KADHIIYRIF WRIYEYADKD FAGTNTRLPP PTIKYLNKTG KEIKGGYA