Gene Pars_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1229 
Symbol 
ID5054077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1112346 
End bp1113062 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID640468775 
Producthypothetical protein 
Protein accessionYP_001153448 
Protein GI145591446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.517441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAACC TCCCGTCTTT AGACCACAGT GCTCATGAAA TTCTCAGCTA TATCGCCATC 
AAGGGGCCTG TAACAATGTA TCGCGTGGCA AGGGATCTCT CCTATCACTT TTCACACACT
TACAGAAAGG CCTACAAGCT CGAGAAGCTG GGCCTTATTA AGAAGGTGGA CAACGGCCGG
GCGGCGCTCT ACGAGGCAAC GCTAGGGGGC TATGTCTACT GCTACTTAGC AGGTATAGAG
CCTCGGAAAG TTGTGGTGTC CAAAATCTCG AAGATGCTTG GCCTAGACCA TTTCTCCGTT
GAGGAAGTGG AGAGCTTCCT CAAGCTCTAT ATATCTGCCG CGGATCATTA CGCCCCCCTC
GGCGGCTTTG TCACCATGGT GTCTTACCTC CTAGAGCGTT GCGGCTGGGA GGTAGAGAGG
TGCGCCAAGC TGGGAGAGAA AGAGCTTATA CTCGCCACCA GGGTGATATC ATACGGCATT
ATCTCCCTTA TAAGGCGGTT CTATGCCCAG AGCCTAATCA TAACTGGAAG GGACTACTTC
GTCGTATACG ACGTGGAAAA AATGAGACTC TTGGCCGCCC ATTGCAGGCT TTGCGGCCGG
GATAAGTACT GTAGTCTCGA CCCATGCCCA ACTCTCCGCA ACGAAGTGGA GCCAAGGCTA
AAGGTAATCA TCCAGCGGGG AGTAGCCAGA GTGGGCAACT GGGCGACAAA TGACTGA
 
Protein sequence
MLNLPSLDHS AHEILSYIAI KGPVTMYRVA RDLSYHFSHT YRKAYKLEKL GLIKKVDNGR 
AALYEATLGG YVYCYLAGIE PRKVVVSKIS KMLGLDHFSV EEVESFLKLY ISAADHYAPL
GGFVTMVSYL LERCGWEVER CAKLGEKELI LATRVISYGI ISLIRRFYAQ SLIITGRDYF
VVYDVEKMRL LAAHCRLCGR DKYCSLDPCP TLRNEVEPRL KVIIQRGVAR VGNWATND