Gene Pars_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1224 
Symbol 
ID5054297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1108926 
End bp1110083 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content58% 
IMG OID640468770 
Productsulfite reductase, dissimilatory-type beta subunit 
Protein accessionYP_001153443 
Protein GI145591441 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02066] sulfite reductase, dissimilatory-type beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.41526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CGCCCATGAA CCCCAAGGCC GCTAGGTTGC AGAAGGTATT CCCAGTCGAC 
TTAGAGAAGT TCCTGCCCGA GAAAGTGTTG AAGAACTATG GCCAATGGGT TGATCGCAAG
TTCCACGGCA ATGGCATAAT TGAGCACATA TCGGCGACGG GGGACAGGAT ATTTACAGTA
AAGGTGGCTA TGCCACCTAA CGCGAGGATA AGTGCAGACA CGTTGGACAA ATTCGCCGAC
ATAGCCGACA GCTTGGGTAT CGGGGCTGTG CGGGTCACCA TGGCCGGAAA CCTGGAGATC
CTCACAGACT CGTTGGACAA GGCGCTTAAG ATCAAGGAGG AGGTGGAGAA GATGGGGTTC
CCAGTAGGCG GCTGGGGCCG CTCCCTGTGG GGCATCAACT CGTGCACGGC CTATCTGACC
TGCACAACTG CGGTGGTGGA CTCGCCCTCA ATCTCCAAAG CCCTAGGCGA CGCCCTGGCG
CCCTACTTCA AGGAGGAGGC CCTCCCAGCG AAGCTTAGGA TATTCGTATC CGGCTGTCCC
TCGATGTGCG CCGGCGGCAC AGCCATCGAC ATCGCCATTG TGGGGCAGTG GGGCGCCCCG
CCGAAGATCA GGGAGGAGGT AATTGGCATG TGCCTACCGC CGCCGAAGGC TTTAGCTAAG
ATCCCCGAGA CGCAGATATT CCTCGTCCAG GTATGCCCCA CCGGCGCGCT CACTTTGCGA
AGGGAGGGCG ACAAGGTGAA GCTTACCCTC ATCGGTGAGA AGTGCATCAA CTGTGCCCGC
TGCAAGGAGA ACTGCGACGC CTTCGACTAC GACCCCGAAA ACGTCGGTGT GGCGATATTG
GTGGGTGGCA AGCTCTCCAA CACAGGAACC GGGCCTAGGC TTGCCAGAGT GCTAGTACCG
TGGCTCCCTG CAATACCGCC TAAGTACGAG GAGATCGTGG CGGTTGTTAA ACACGTCGTC
GAGGTGTGGA GGCAAAACGC CAAACCCGGC GAGAGGCTAG CCGACTTCAT AGACAGAGTT
GGGTGGTCTA AGTTCTTGGA GATGGTGGGC TTGAAAGAGG TGCACGACTA CTACCAGCGG
GTGCCAGAAT TCGCGAGGAC GTTCCTGGCG TTTAGAGGCC GCGGCGACGT GTATAAGAGG
CTTAGGGACG CCTTGTGA
 
Protein sequence
MTAAPMNPKA ARLQKVFPVD LEKFLPEKVL KNYGQWVDRK FHGNGIIEHI SATGDRIFTV 
KVAMPPNARI SADTLDKFAD IADSLGIGAV RVTMAGNLEI LTDSLDKALK IKEEVEKMGF
PVGGWGRSLW GINSCTAYLT CTTAVVDSPS ISKALGDALA PYFKEEALPA KLRIFVSGCP
SMCAGGTAID IAIVGQWGAP PKIREEVIGM CLPPPKALAK IPETQIFLVQ VCPTGALTLR
REGDKVKLTL IGEKCINCAR CKENCDAFDY DPENVGVAIL VGGKLSNTGT GPRLARVLVP
WLPAIPPKYE EIVAVVKHVV EVWRQNAKPG ERLADFIDRV GWSKFLEMVG LKEVHDYYQR
VPEFARTFLA FRGRGDVYKR LRDAL