Gene Pars_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1217 
Symbol 
ID5055672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1101882 
End bp1102322 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID640468764 
Producthypothetical protein 
Protein accessionYP_001153437 
Protein GI145591435 
COG category[S] Function unknown 
COG ID[COG2427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.430045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGG CGGAGGAGAG GCTGATAAAG GCGCTGGAGA ATCCAAAATT GCAAGAGGCC 
CTCGCCGACT TGGCCGAGAG GGCTGACATA CTGCGTGATC TCGTAAACAC GTTGTGGGAG
TTTAAGCGTA GCGGAGTACT TGACGATCTG CTAAACGCCG CGGCGACGCT TAGGTTCTTC
ACCGAGGGCA TACTCTCCAA GGACTTTATG GAAAAGGTGG CTAAGCTGCA AGACGTGGCC
CTGGTGGCCG GGGTAAATAT GGCGCAAGAC GTCGCAAAGG TGGACTGCCT CACCCACGCC
GTCGCCGCGG CGGATGCCGA CAAACAAGTG GGGCTAATGG GCCTCCTCGC GGCGTTGCGC
GACCCCGACG TGCAGCGGGG GCTGGGCTTC TTCATATCAG TGCTGAAAAA CCTCGGCACC
TGCCTCGCCG CCAAGAAGTA G
 
Protein sequence
MSSAEERLIK ALENPKLQEA LADLAERADI LRDLVNTLWE FKRSGVLDDL LNAAATLRFF 
TEGILSKDFM EKVAKLQDVA LVAGVNMAQD VAKVDCLTHA VAAADADKQV GLMGLLAALR
DPDVQRGLGF FISVLKNLGT CLAAKK