| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1215 |
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| Symbol | |
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| ID | 5056424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1100650 |
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| End bp | 1101378 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640468762 |
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| Product | uroporphyrinogen-III synthase (HemD), conjectural |
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| Protein accession | YP_001153435 |
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| Protein GI | 145591433 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGCTAG ATAACAATTT TTATATTGAA GCCGCATTGA TCTGCGTGAA AATCGTGGTA
ACCAGTGGCT GGGCGGGAGA GGCTTTTCGA AAGGCGTTGC GGGGAGCCGA GGTGTACGTG
GTCCCCGTTC TTAGGCTAAC CCCCGTGGAG GTTGATGTAA AGGCCGTGGA GGAGGCGGTG
GCACAGAGCG ACTTAGTGGT CTTCGTCTCG GGGAGGGCGG CGTATCGGCT CAAGGAGCTG
GGGGCGAAGT TGGAGCTGAC GGGCAAGGTG GTGGCGACAG CTGAGGGGGC AAAGGGCGCC
GTCATGGTGA AAAACGCCTA CGGCGTTGAG CCGCAGCTGG TCTACGACAC GTCGGAGGAT
TTAGCCAAGG CCCTGCCTGG ATGTAGGCGC GGCGTTGTCT TCCACCACGG CGAGAGAGCC
GCCGAGCTGG TAGAGGTGCT GGAGGTCAAG TGCCCCGTTG CCGAGTTTTA CACATACCGG
GCGGTCCCAG ACGAGGAGAC CATTAAGTCC ATACCCCCCG CCGATGTTTA CGTCTTTTTC
AGCGCCCTCG CGGCCGAGGC CGTTGGGGAG AGGCGGCCTG AGCTCATCAA GGGCGCCTTG
GCGGTGGCGG CGGGCCCAGC GGTGGAGAGG GCCCTCTTGC GCTACGGGGC AGTAGTGAGG
AGGCCTCCCC GCGGGAGGAT AGGAGATGTG GTGGAGTACG TCAAGAGGCT ACTTGAGGAG
CTTCGCTAG
|
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| Protein sequence | MGLDNNFYIE AALICVKIVV TSGWAGEAFR KALRGAEVYV VPVLRLTPVE VDVKAVEEAV
AQSDLVVFVS GRAAYRLKEL GAKLELTGKV VATAEGAKGA VMVKNAYGVE PQLVYDTSED
LAKALPGCRR GVVFHHGERA AELVEVLEVK CPVAEFYTYR AVPDEETIKS IPPADVYVFF
SALAAEAVGE RRPELIKGAL AVAAGPAVER ALLRYGAVVR RPPRGRIGDV VEYVKRLLEE
LR
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