Gene Pars_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1214 
Symbol 
ID5056401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1099825 
End bp1100670 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content57% 
IMG OID640468761 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001153434 
Protein GI145591432 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAA ATTCCTTATT TCACTCCAAA GAGAAATATT TTATAGTTCT GTATATCTCC 
GCGAACATGA AGTGGGCGGT GATCATCACG TCGGGCCGCC CCTCTAAGGC AGACCTTCTG
GCAAGGTTGG TATTTAAACA CGGCGGGGAG GCCCTCTACC TGCCCGTTGT TAAGGTGGAA
GAAAGGGGGG CAGATGCACA AGAAGTTCTG GAGGCCTTGG CTTGGAGCGA GGCTGTTCTT
TTTATGACGG GGCAGTCCGC ATGGGGCCTT GCCGAGATGT TGAAGAGACA CAGCGCGTTG
GAGAAGGCCA AGGAAATGCT CAGGTCCAGG GTGGTGGTGT GCAGGGGAAG CAAGGCATCT
GGCAACGTCA AGACTCAGTT CGGCGTGGAG TGCCCCAACT TAGGCGAGAC CATCGATGAG
ATGATGCCGA AAATTGGACA ATACGTCTCA GGCAAGAGGC TACTAGTGTC CTTTTACGGG
GTGGTGGACA GCGAGCTTCT CGAAAAGTTA AGGGCTGTGG CCGGGGAGGT GAGCTACGTG
CAGACATACA GCACAGTGGA GGCGCCGGAG GAAAACGCGT TGGAGGCGGC GAGGCGGGTG
GCGGAGGGGG GCTACATAAT CGTCTTCACC AGCGCAGTGG GGGCAAGTAC CTTCTTCGCC
GCGGCTCAGC GCCACGGCCT CTTGGAGAAG GTGGTAGAGG CGCTCAACTC TGGGCGCTCC
ATAGCCGCTG TCATAGGCCC TGTGACGGAG GAGGAGGTGA AGAGGTGGGG CGTTGAGAAG
GTGGTAAAGC CCGAGAAGCC CTTCTTGGCG TATCTAGCGG AGGAGCTAGC GAAGCTCCTC
AAGTAG
 
Protein sequence
MYKNSLFHSK EKYFIVLYIS ANMKWAVIIT SGRPSKADLL ARLVFKHGGE ALYLPVVKVE 
ERGADAQEVL EALAWSEAVL FMTGQSAWGL AEMLKRHSAL EKAKEMLRSR VVVCRGSKAS
GNVKTQFGVE CPNLGETIDE MMPKIGQYVS GKRLLVSFYG VVDSELLEKL RAVAGEVSYV
QTYSTVEAPE ENALEAARRV AEGGYIIVFT SAVGASTFFA AAQRHGLLEK VVEALNSGRS
IAAVIGPVTE EEVKRWGVEK VVKPEKPFLA YLAEELAKLL K