Gene Pars_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1200 
Symbol 
ID5055218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1087623 
End bp1087859 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content46% 
IMG OID640468747 
Producthypothetical protein 
Protein accessionYP_001153420 
Protein GI145591418 
COG category[S] Function unknown 
COG ID[COG4274] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0664632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.476152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGAGA GGTCTGAGAG GATTAAGGAG GTTAACAAGG AGCTTGAGTT GTACGGCGTA 
AGGGTGGTCC ACCAATTCGT CACCTTTGGC GAGTACGATT TTGTAAACAT AGTCGAGGTG
GATAAGCCCG AGAATTTGTT AAAGGCCCTT ATTGAGCTCA ACAGTAGGGG TTCTGTGAGG
ACCACTACGC TATATGCATT TCCTGTAGAT GAGGCTCTAA AGGCTCTTAA GTCTTAA
 
Protein sequence
MKERSERIKE VNKELELYGV RVVHQFVTFG EYDFVNIVEV DKPENLLKAL IELNSRGSVR 
TTTLYAFPVD EALKALKS